Amplicon details

Amplicon:

173 bp
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JN948890.1 emblreltgn Mus musculus targeted non-condition... 39216 bp Mus musculus QL-ELE-00-003 173 bp View
JN948114.1 nt Mus musculus targeted KO-first, con... 37885 bp Mus musculus QL-ELE-00-003 173 bp View
JN948115.1 nt Mus musculus targeted KO-first, con... 37883 bp Mus musculus QL-ELE-00-003 173 bp View
JN948116.1 nt Mus musculus targeted KO-first, con... 38467 bp Mus musculus QL-ELE-00-003 173 bp View
JN948117.1 nt Mus musculus targeted non-condition... 38045 bp Mus musculus QL-ELE-00-003 173 bp View
JN948118.1 nt Mus musculus targeted non-condition... 38216 bp Mus musculus QL-ELE-00-003 173 bp View
JN948119.1 nt Mus musculus targeted non-condition... 37978 bp Mus musculus QL-ELE-00-003 173 bp View
JN948120.1 nt Mus musculus targeted non-condition... 37957 bp Mus musculus QL-ELE-00-003 173 bp View
JN948121.1 nt Mus musculus targeted non-condition... 37988 bp Mus musculus QL-ELE-00-003 173 bp View
JN948122.1 nt Mus musculus targeted non-condition... 39440 bp Mus musculus QL-ELE-00-003 173 bp View
JN948123.1 nt Mus musculus targeted non-condition... 38172 bp Mus musculus QL-ELE-00-003 173 bp View
JN948124.1 nt Mus musculus targeted KO-first, con... 37990 bp Mus musculus QL-ELE-00-003 173 bp View
JN948125.1 nt Mus musculus targeted non-condition... 38271 bp Mus musculus QL-ELE-00-003 173 bp View
JN948126.1 nt Mus musculus targeted KO-first, con... 38102 bp Mus musculus QL-ELE-00-003 173 bp View
JN948127.1 nt Mus musculus targeted non-condition... 37979 bp Mus musculus QL-ELE-00-003 173 bp View
JN948128.1 nt Mus musculus targeted KO-first, con... 38035 bp Mus musculus QL-ELE-00-003 173 bp View
JN948129.1 nt Mus musculus targeted non-condition... 38503 bp Mus musculus QL-ELE-00-003 173 bp View
JN948130.1 nt Mus musculus targeted non-condition... 37924 bp Mus musculus QL-ELE-00-003 173 bp View
JN948131.1 nt Mus musculus targeted non-condition... 37883 bp Mus musculus QL-ELE-00-003 173 bp View
JN948132.1 nt Mus musculus targeted non-condition... 38446 bp Mus musculus QL-ELE-00-003 173 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.