European Commission logo
Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 173 bp 
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
KT895272.1 nt Cloning vector pPasscode1, complete... 5887 bp Cloning vector pPasscode1 QL-ELE-00-003 173 bp View
JN946751.1 nt Mus musculus targeted KO-first, con... 36490 bp Mus musculus QL-ELE-00-003 173 bp View
KT826598.1 nt Cloning vector pNB51, complete sequ... 5684 bp Cloning vector pNB51 QL-ELE-00-003 173 bp View
NRN_CS375761 nrnl1 Sequence 13 from Patent WO200603406... 1776 bp unidentified QL-ELE-00-003 173 bp View
NRN_CS355416 nrnl1 Sequence 82 from Patent WO200606971... 6233 bp unidentified QL-ELE-00-003 173 bp View
NRN_CQ821459 nrnl1 Sequence 15 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-003 173 bp View
NRN_CQ827331 nrnl1 Sequence 23 from Patent WO200405088... 795 bp unidentified QL-ELE-00-003 173 bp View
NRN_CS242742 nrnl1 Sequence 394 from Patent WO2005116251. 5240 bp unidentified QL-ELE-00-003 173 bp View
NRN_CS359766 nrnl1 Sequence 105 from Patent WO2006075084. 5745 bp unidentified QL-ELE-00-003 173 bp View
JN948802.1 emblreltgn Mus musculus targeted KO-first, con... 39356 bp Mus musculus QL-ELE-00-003 173 bp View
NRN_CS401511 nrnl1 Sequence 8 from Patent WO2006013072... 5557 bp unidentified QL-ELE-00-003 173 bp View
JN946752.1 nt Mus musculus targeted KO-first, con... 38081 bp Mus musculus QL-ELE-00-003 173 bp View
NRN_CS362346 nrnl1 Sequence 27 from Patent WO2004108933. 9660 bp unidentified QL-ELE-00-003 173 bp View
NRN_CS503201 nrnl1 Sequence 14 from Patent WO200701184... 12531 bp unidentified QL-ELE-00-003 173 bp View
JN948803.1 emblreltgn Mus musculus targeted KO-first, con... 38598 bp Mus musculus QL-ELE-00-003 173 bp View
NRN_CQ792386 nrnl1 Sequence 131 from Patent WO20040206... 5668 bp unidentified QL-ELE-00-003 173 bp View
NRN_CQ887767 nrnl1 Sequence 48 from Patent WO200406335... 17118 bp unidentified QL-ELE-00-003 173 bp View
JN960687.1 emblreltgn Mus musculus targeted KO-first, con... 38181 bp Mus musculus QL-ELE-00-003 173 bp View
NRN_CS359769 nrnl1 Sequence 108 from Patent WO2006075084. 5848 bp unidentified QL-ELE-00-003 173 bp View
NRN_CS193166 nrnl1 Sequence 4 from Patent WO2005100545... 6433 bp unidentified QL-ELE-00-003 173 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.