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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 173 bp 
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JN954963.1 nt Mus musculus targeted deletion, lac... 37222 bp Mus musculus QL-ELE-00-003 173 bp View
JN954964.1 nt Mus musculus targeted non-condition... 39035 bp Mus musculus QL-ELE-00-003 173 bp View
JN954965.1 nt Mus musculus targeted KO-first, con... 38146 bp Mus musculus QL-ELE-00-003 173 bp View
JN954966.1 nt Mus musculus targeted KO-first, con... 39871 bp Mus musculus QL-ELE-00-003 173 bp View
JN954967.1 nt Mus musculus targeted non-condition... 39870 bp Mus musculus QL-ELE-00-003 173 bp View
JN954968.1 nt Mus musculus targeted deletion, lac... 37222 bp Mus musculus QL-ELE-00-003 173 bp View
JN954969.1 nt Mus musculus targeted non-condition... 37926 bp Mus musculus QL-ELE-00-003 173 bp View
JN954970.1 nt Mus musculus targeted KO-first, con... 37787 bp Mus musculus QL-ELE-00-003 173 bp View
JN954971.1 nt Mus musculus targeted KO-first, con... 38045 bp Mus musculus QL-ELE-00-003 173 bp View
JN954972.1 nt Mus musculus targeted KO-first, con... 38056 bp Mus musculus QL-ELE-00-003 173 bp View
JN954973.1 nt Mus musculus targeted non-condition... 40505 bp Mus musculus QL-ELE-00-003 173 bp View
JN954974.1 nt Mus musculus targeted non-condition... 38029 bp Mus musculus QL-ELE-00-003 173 bp View
JN954975.1 nt Mus musculus targeted non-condition... 38607 bp Mus musculus QL-ELE-00-003 173 bp View
JN954976.1 nt Mus musculus targeted KO-first, con... 39274 bp Mus musculus QL-ELE-00-003 173 bp View
JN954977.1 nt Mus musculus targeted KO-first, con... 41064 bp Mus musculus QL-ELE-00-003 173 bp View
JN954978.1 nt Mus musculus targeted KO-first, con... 37989 bp Mus musculus QL-ELE-00-003 173 bp View
JN954979.1 nt Mus musculus targeted non-condition... 38997 bp Mus musculus QL-ELE-00-003 173 bp View
JN954980.1 nt Mus musculus targeted non-condition... 37956 bp Mus musculus QL-ELE-00-003 173 bp View
JN954981.1 nt Mus musculus targeted KO-first, con... 39147 bp Mus musculus QL-ELE-00-003 173 bp View
JN954982.1 nt Mus musculus targeted KO-first, con... 40123 bp Mus musculus QL-ELE-00-003 173 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.