European Commission logo
Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 173 bp 
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JN954241.1 nt Mus musculus targeted deletion, lac... 37222 bp Mus musculus QL-ELE-00-003 173 bp View
JN954242.1 nt Mus musculus targeted KO-first, con... 38133 bp Mus musculus QL-ELE-00-003 173 bp View
JN954243.1 nt Mus musculus targeted KO-first, con... 37939 bp Mus musculus QL-ELE-00-003 173 bp View
LT726934.1 nt Mammalian expression vector pcDNA3-... 7476 bp Mammalian expression vector pcDNA3-hIRAK1 QL-ELE-00-003 173 bp View
JN954525.1 nt Mus musculus targeted non-condition... 40047 bp Mus musculus QL-ELE-00-003 173 bp View
JN954526.1 nt Mus musculus targeted KO-first, con... 38506 bp Mus musculus QL-ELE-00-003 173 bp View
JN954527.1 nt Mus musculus targeted KO-first, con... 38076 bp Mus musculus QL-ELE-00-003 173 bp View
JN954528.1 nt Mus musculus targeted KO-first, con... 36323 bp Mus musculus QL-ELE-00-003 173 bp View
JN954529.1 nt Mus musculus targeted KO-first, con... 39407 bp Mus musculus QL-ELE-00-003 173 bp View
JN954530.1 nt Mus musculus targeted KO-first, con... 38048 bp Mus musculus QL-ELE-00-003 173 bp View
JN954531.1 nt Mus musculus targeted KO-first, con... 37844 bp Mus musculus QL-ELE-00-003 173 bp View
JN954532.1 nt Mus musculus targeted KO-first, con... 38353 bp Mus musculus QL-ELE-00-003 173 bp View
JN954533.1 nt Mus musculus targeted non-condition... 38337 bp Mus musculus QL-ELE-00-003 173 bp View
JN954534.1 nt Mus musculus targeted KO-first, con... 38537 bp Mus musculus QL-ELE-00-003 173 bp View
JN954535.1 nt Mus musculus targeted non-condition... 39629 bp Mus musculus QL-ELE-00-003 173 bp View
JN954536.1 nt Mus musculus targeted KO-first, con... 38120 bp Mus musculus QL-ELE-00-003 173 bp View
JN954537.1 nt Mus musculus targeted non-condition... 40550 bp Mus musculus QL-ELE-00-003 173 bp View
JN954538.1 nt Mus musculus targeted KO-first, con... 38010 bp Mus musculus QL-ELE-00-003 173 bp View
LT727007.1 nt Mammalian expression vector pcDNA3-... 8197 bp Mammalian expression vector pcDNA3-RF-PITSLRE-Di-4mD QL-ELE-00-003 173 bp View
JN954539.1 nt Mus musculus targeted KO-first, con... 37949 bp Mus musculus QL-ELE-00-003 173 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.