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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 173 bp 
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JN953289.1 nt Mus musculus targeted non-condition... 36525 bp Mus musculus QL-ELE-00-003 173 bp View
JN945525.1 emblreltgn Mus musculus targeted deletion, lac... 37222 bp Mus musculus QL-ELE-00-003 173 bp View
JN953291.1 nt Mus musculus targeted KO-first, con... 40077 bp Mus musculus QL-ELE-00-003 173 bp View
JN953292.1 nt Mus musculus targeted KO-first, con... 37922 bp Mus musculus QL-ELE-00-003 173 bp View
JN953293.1 nt Mus musculus targeted KO-first, con... 38213 bp Mus musculus QL-ELE-00-003 173 bp View
JN953294.1 nt Mus musculus targeted non-condition... 36463 bp Mus musculus QL-ELE-00-003 173 bp View
JN953295.1 nt Mus musculus targeted KO-first, con... 39896 bp Mus musculus QL-ELE-00-003 173 bp View
JN953296.1 nt Mus musculus targeted KO-first, con... 40318 bp Mus musculus QL-ELE-00-003 173 bp View
JN945532.1 emblreltgn Mus musculus targeted KO-first, con... 38191 bp Mus musculus QL-ELE-00-003 173 bp View
JN953298.1 nt Mus musculus targeted non-condition... 36240 bp Mus musculus QL-ELE-00-003 173 bp View
JN953299.1 nt Mus musculus targeted KO-first, con... 38052 bp Mus musculus QL-ELE-00-003 173 bp View
JN953300.1 nt Mus musculus targeted KO-first, con... 40417 bp Mus musculus QL-ELE-00-003 173 bp View
JN953301.1 nt Mus musculus targeted KO-first, con... 38395 bp Mus musculus QL-ELE-00-003 173 bp View
JN953302.1 nt Mus musculus targeted KO-first, con... 38148 bp Mus musculus QL-ELE-00-003 173 bp View
JN953303.1 nt Mus musculus targeted non-condition... 38003 bp Mus musculus QL-ELE-00-003 173 bp View
JN945539.1 emblreltgn Mus musculus targeted KO-first, con... 38059 bp Mus musculus QL-ELE-00-003 173 bp View
JN953306.1 nt Mus musculus targeted non-condition... 40179 bp Mus musculus QL-ELE-00-003 173 bp View
JN953307.1 nt Mus musculus targeted KO-first, con... 38071 bp Mus musculus QL-ELE-00-003 173 bp View
JN953308.1 nt Mus musculus targeted KO-first, con... 36469 bp Mus musculus QL-ELE-00-003 173 bp View
JN953309.1 nt Mus musculus targeted non-condition... 38783 bp Mus musculus QL-ELE-00-003 173 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.