Amplicon details

Amplicon:

173 bp
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JN952722.1 nt Mus musculus targeted non-condition... 38113 bp Mus musculus QL-ELE-00-003 173 bp View
JN945017.1 emblreltgn Mus musculus targeted non-condition... 39474 bp Mus musculus QL-ELE-00-003 173 bp View
JN952725.1 nt Mus musculus targeted non-condition... 37946 bp Mus musculus QL-ELE-00-003 173 bp View
JN952726.1 nt Mus musculus targeted non-condition... 38055 bp Mus musculus QL-ELE-00-003 173 bp View
JN952727.1 nt Mus musculus targeted non-condition... 40231 bp Mus musculus QL-ELE-00-003 173 bp View
JN952728.1 nt Mus musculus targeted non-condition... 38162 bp Mus musculus QL-ELE-00-003 173 bp View
JN952729.1 nt Mus musculus targeted non-condition... 38769 bp Mus musculus QL-ELE-00-003 173 bp View
JN952730.1 nt Mus musculus targeted non-condition... 38050 bp Mus musculus QL-ELE-00-003 173 bp View
JN945024.1 emblreltgn Mus musculus targeted KO-first, con... 38626 bp Mus musculus QL-ELE-00-003 173 bp View
JN952732.1 nt Mus musculus targeted KO-first, con... 40311 bp Mus musculus QL-ELE-00-003 173 bp View
JN952733.1 nt Mus musculus targeted KO-first, con... 37974 bp Mus musculus QL-ELE-00-003 173 bp View
JN952734.1 nt Mus musculus targeted non-condition... 38475 bp Mus musculus QL-ELE-00-003 173 bp View
JN952735.1 nt Mus musculus targeted non-condition... 39964 bp Mus musculus QL-ELE-00-003 173 bp View
JN952736.1 nt Mus musculus targeted non-condition... 38769 bp Mus musculus QL-ELE-00-003 173 bp View
JN952737.1 nt Mus musculus targeted non-condition... 38630 bp Mus musculus QL-ELE-00-003 173 bp View
JN945031.1 emblreltgn Mus musculus targeted non-condition... 39640 bp Mus musculus QL-ELE-00-003 173 bp View
JN952739.1 nt Mus musculus targeted KO-first, con... 38030 bp Mus musculus QL-ELE-00-003 173 bp View
JN952740.1 nt Mus musculus targeted KO-first, con... 39061 bp Mus musculus QL-ELE-00-003 173 bp View
JN952741.1 nt Mus musculus targeted non-condition... 40517 bp Mus musculus QL-ELE-00-003 173 bp View
JN952742.1 nt Mus musculus targeted KO-first, con... 38507 bp Mus musculus QL-ELE-00-003 173 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.