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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 173 bp 
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JN951137.1 nt Mus musculus targeted KO-first, con... 37962 bp Mus musculus QL-ELE-00-003 173 bp View
JN949220.1 emblreltgn Mus musculus targeted deletion, lac... 37222 bp Mus musculus QL-ELE-00-003 173 bp View
JN951139.1 nt Mus musculus targeted KO-first, con... 36648 bp Mus musculus QL-ELE-00-003 173 bp View
JN951140.1 nt Mus musculus targeted non-condition... 37924 bp Mus musculus QL-ELE-00-003 173 bp View
JN951141.1 nt Mus musculus targeted non-condition... 38244 bp Mus musculus QL-ELE-00-003 173 bp View
JN951142.1 nt Mus musculus targeted non-condition... 36544 bp Mus musculus QL-ELE-00-003 173 bp View
JN951143.1 nt Mus musculus targeted non-condition... 38350 bp Mus musculus QL-ELE-00-003 173 bp View
JN951144.1 nt Mus musculus targeted KO-first, con... 38511 bp Mus musculus QL-ELE-00-003 173 bp View
JN949227.1 emblreltgn Mus musculus targeted KO-first, con... 37982 bp Mus musculus QL-ELE-00-003 173 bp View
JN951146.1 nt Mus musculus targeted KO-first, con... 37934 bp Mus musculus QL-ELE-00-003 173 bp View
JN951147.1 nt Mus musculus targeted KO-first, con... 37952 bp Mus musculus QL-ELE-00-003 173 bp View
JN951148.1 nt Mus musculus targeted KO-first, con... 38227 bp Mus musculus QL-ELE-00-003 173 bp View
JN951149.1 nt Mus musculus targeted non-condition... 39160 bp Mus musculus QL-ELE-00-003 173 bp View
JN951150.1 nt Mus musculus targeted KO-first, con... 38490 bp Mus musculus QL-ELE-00-003 173 bp View
JN951151.1 nt Mus musculus targeted KO-first, con... 38042 bp Mus musculus QL-ELE-00-003 173 bp View
JN949234.1 emblreltgn Mus musculus targeted non-condition... 36623 bp Mus musculus QL-ELE-00-003 173 bp View
JN951153.1 nt Mus musculus targeted deletion, lac... 37222 bp Mus musculus QL-ELE-00-003 173 bp View
JN951154.1 nt Mus musculus targeted KO-first, con... 38246 bp Mus musculus QL-ELE-00-003 173 bp View
JN951155.1 nt Mus musculus targeted non-condition... 40150 bp Mus musculus QL-ELE-00-003 173 bp View
JN951156.1 nt Mus musculus targeted KO-first, con... 39156 bp Mus musculus QL-ELE-00-003 173 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.