Amplicon details

Amplicon:

173 bp
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JN956090.1 nt Mus musculus targeted KO-first, con... 38097 bp Mus musculus QL-ELE-00-003 173 bp View
JN956091.1 nt Mus musculus targeted KO-first, con... 38324 bp Mus musculus QL-ELE-00-003 173 bp View
JN956092.1 nt Mus musculus targeted KO-first, con... 38130 bp Mus musculus QL-ELE-00-003 173 bp View
JN956093.1 nt Mus musculus targeted non-condition... 38842 bp Mus musculus QL-ELE-00-003 173 bp View
JN956094.1 nt Mus musculus targeted non-condition... 39186 bp Mus musculus QL-ELE-00-003 173 bp View
JN956095.1 nt Mus musculus targeted non-condition... 37925 bp Mus musculus QL-ELE-00-003 173 bp View
JN956096.1 nt Mus musculus targeted non-condition... 37928 bp Mus musculus QL-ELE-00-003 173 bp View
JN956097.1 nt Mus musculus targeted non-condition... 39533 bp Mus musculus QL-ELE-00-003 173 bp View
JN956098.1 nt Mus musculus targeted non-condition... 37786 bp Mus musculus QL-ELE-00-003 173 bp View
JN956099.1 nt Mus musculus targeted non-condition... 36835 bp Mus musculus QL-ELE-00-003 173 bp View
JN956100.1 nt Mus musculus targeted KO-first, con... 40414 bp Mus musculus QL-ELE-00-003 173 bp View
JN956101.1 nt Mus musculus targeted KO-first, con... 38356 bp Mus musculus QL-ELE-00-003 173 bp View
JN956102.1 nt Mus musculus targeted KO-first, con... 38497 bp Mus musculus QL-ELE-00-003 173 bp View
JN956103.1 nt Mus musculus targeted non-condition... 38000 bp Mus musculus QL-ELE-00-003 173 bp View
JN956104.1 nt Mus musculus targeted KO-first, con... 38049 bp Mus musculus QL-ELE-00-003 173 bp View
JN956105.1 nt Mus musculus targeted non-condition... 37999 bp Mus musculus QL-ELE-00-003 173 bp View
JN956106.1 nt Mus musculus targeted KO-first, con... 37996 bp Mus musculus QL-ELE-00-003 173 bp View
JN956107.1 nt Mus musculus targeted KO-first, con... 38009 bp Mus musculus QL-ELE-00-003 173 bp View
JN956108.1 nt Mus musculus targeted KO-first, con... 37974 bp Mus musculus QL-ELE-00-003 173 bp View
JN956109.1 nt Mus musculus targeted non-condition... 40788 bp Mus musculus QL-ELE-00-003 173 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.