Amplicon details

Amplicon:

173 bp
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JN961962.1 nt Mus musculus targeted non-condition... 38130 bp Mus musculus QL-ELE-00-003 173 bp View
JN961963.1 nt Mus musculus targeted KO-first, con... 38972 bp Mus musculus QL-ELE-00-003 173 bp View
JN961964.1 nt Mus musculus targeted non-condition... 38561 bp Mus musculus QL-ELE-00-003 173 bp View
JN961965.1 nt Mus musculus targeted KO-first, con... 40682 bp Mus musculus QL-ELE-00-003 173 bp View
JN961966.1 nt Mus musculus targeted non-condition... 39830 bp Mus musculus QL-ELE-00-003 173 bp View
JN961967.1 nt Mus musculus targeted KO-first, con... 38395 bp Mus musculus QL-ELE-00-003 173 bp View
JN961968.1 nt Mus musculus targeted non-condition... 38375 bp Mus musculus QL-ELE-00-003 173 bp View
JN961969.1 nt Mus musculus targeted non-condition... 40584 bp Mus musculus QL-ELE-00-003 173 bp View
JN961970.1 nt Mus musculus targeted non-condition... 37103 bp Mus musculus QL-ELE-00-003 173 bp View
JN961971.1 nt Mus musculus targeted non-condition... 38400 bp Mus musculus QL-ELE-00-003 173 bp View
JN961972.1 nt Mus musculus targeted non-condition... 37900 bp Mus musculus QL-ELE-00-003 173 bp View
JN961973.1 nt Mus musculus targeted non-condition... 41142 bp Mus musculus QL-ELE-00-003 173 bp View
JN961974.1 nt Mus musculus targeted non-condition... 36527 bp Mus musculus QL-ELE-00-003 173 bp View
JN961975.1 nt Mus musculus targeted non-condition... 37977 bp Mus musculus QL-ELE-00-003 173 bp View
JN961976.1 nt Mus musculus targeted non-condition... 38252 bp Mus musculus QL-ELE-00-003 173 bp View
JN961977.1 nt Mus musculus targeted KO-first, con... 38417 bp Mus musculus QL-ELE-00-003 173 bp View
JN961978.1 nt Mus musculus targeted non-condition... 39706 bp Mus musculus QL-ELE-00-003 173 bp View
JN961979.1 nt Mus musculus targeted deletion, lac... 37222 bp Mus musculus QL-ELE-00-003 173 bp View
JN961980.1 nt Mus musculus targeted KO-first, con... 38312 bp Mus musculus QL-ELE-00-003 173 bp View
JN961981.1 nt Mus musculus targeted non-condition... 38088 bp Mus musculus QL-ELE-00-003 173 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.