Amplicon details

Amplicon:

173 bp
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JN946529.1 nt Mus musculus targeted non-condition... 36602 bp Mus musculus QL-ELE-00-003 173 bp View
JN948772.1 emblreltgn Mus musculus targeted KO-first, con... 40041 bp Mus musculus QL-ELE-00-003 173 bp View
JN946530.1 nt Mus musculus targeted non-condition... 39062 bp Mus musculus QL-ELE-00-003 173 bp View
JN946531.1 nt Mus musculus targeted non-condition... 40253 bp Mus musculus QL-ELE-00-003 173 bp View
JN946532.1 nt Mus musculus targeted non-condition... 39002 bp Mus musculus QL-ELE-00-003 173 bp View
JN946533.1 nt Mus musculus targeted non-condition... 38033 bp Mus musculus QL-ELE-00-003 173 bp View
JN946534.1 nt Mus musculus targeted KO-first, con... 37884 bp Mus musculus QL-ELE-00-003 173 bp View
JN946535.1 nt Mus musculus targeted KO-first, con... 37960 bp Mus musculus QL-ELE-00-003 173 bp View
JN946536.1 nt Mus musculus targeted non-condition... 37819 bp Mus musculus QL-ELE-00-003 173 bp View
JN946537.1 nt Mus musculus targeted KO-first, con... 38005 bp Mus musculus QL-ELE-00-003 173 bp View
JN946538.1 nt Mus musculus targeted KO-first, con... 38034 bp Mus musculus QL-ELE-00-003 173 bp View
JN946539.1 nt Mus musculus targeted KO-first, con... 39685 bp Mus musculus QL-ELE-00-003 173 bp View
JN946540.1 nt Mus musculus targeted non-condition... 39681 bp Mus musculus QL-ELE-00-003 173 bp View
JN946541.1 nt Mus musculus targeted KO-first, con... 38022 bp Mus musculus QL-ELE-00-003 173 bp View
JN946542.1 nt Mus musculus targeted non-condition... 37966 bp Mus musculus QL-ELE-00-003 173 bp View
JN946543.1 nt Mus musculus targeted KO-first, con... 37961 bp Mus musculus QL-ELE-00-003 173 bp View
JN948773.1 emblreltgn Mus musculus targeted KO-first, con... 38840 bp Mus musculus QL-ELE-00-003 173 bp View
JN946544.1 nt Mus musculus targeted deletion, lac... 37222 bp Mus musculus QL-ELE-00-003 173 bp View
JN946545.1 nt Mus musculus targeted KO-first, con... 38101 bp Mus musculus QL-ELE-00-003 173 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-003 173 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.