Amplicon details

Amplicon:

173 bp
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JN946435.1 nt Mus musculus targeted KO-first, con... 37997 bp Mus musculus QL-ELE-00-003 173 bp View
JN946436.1 nt Mus musculus targeted KO-first, con... 38059 bp Mus musculus QL-ELE-00-003 173 bp View
JN946437.1 nt Mus musculus targeted non-condition... 37970 bp Mus musculus QL-ELE-00-003 173 bp View
JN946438.1 nt Mus musculus targeted KO-first, con... 38046 bp Mus musculus QL-ELE-00-003 173 bp View
JN948766.1 emblreltgn Mus musculus targeted non-condition... 39193 bp Mus musculus QL-ELE-00-003 173 bp View
JN946439.1 nt Mus musculus targeted non-condition... 38013 bp Mus musculus QL-ELE-00-003 173 bp View
JN946440.1 nt Mus musculus targeted KO-first, con... 39741 bp Mus musculus QL-ELE-00-003 173 bp View
JN946441.1 nt Mus musculus targeted non-condition... 39730 bp Mus musculus QL-ELE-00-003 173 bp View
JN946442.1 nt Mus musculus targeted non-condition... 40235 bp Mus musculus QL-ELE-00-003 173 bp View
JN946443.1 nt Mus musculus targeted non-condition... 38230 bp Mus musculus QL-ELE-00-003 173 bp View
JN946444.1 nt Mus musculus targeted non-condition... 38516 bp Mus musculus QL-ELE-00-003 173 bp View
JN946445.1 nt Mus musculus targeted non-condition... 38072 bp Mus musculus QL-ELE-00-003 173 bp View
JN946446.1 nt Mus musculus targeted non-condition... 38102 bp Mus musculus QL-ELE-00-003 173 bp View
JN946447.1 nt Mus musculus targeted KO-first, con... 40286 bp Mus musculus QL-ELE-00-003 173 bp View
JN946448.1 nt Mus musculus targeted KO-first, con... 38004 bp Mus musculus QL-ELE-00-003 173 bp View
JN946449.1 nt Mus musculus targeted KO-first, con... 40252 bp Mus musculus QL-ELE-00-003 173 bp View
JN946450.1 nt Mus musculus targeted non-condition... 40172 bp Mus musculus QL-ELE-00-003 173 bp View
JN946451.1 nt Mus musculus targeted KO-first, con... 38114 bp Mus musculus QL-ELE-00-003 173 bp View
JN946452.1 nt Mus musculus targeted KO-first, con... 36452 bp Mus musculus QL-ELE-00-003 173 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-003 173 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.