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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 173 bp 
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JN946341.1 nt Mus musculus targeted KO-first, con... 38065 bp Mus musculus QL-ELE-00-003 173 bp View
JN946342.1 nt Mus musculus targeted non-condition... 38054 bp Mus musculus QL-ELE-00-003 173 bp View
JN946343.1 nt Mus musculus targeted KO-first, con... 36499 bp Mus musculus QL-ELE-00-003 173 bp View
JN946344.1 nt Mus musculus targeted KO-first, con... 38565 bp Mus musculus QL-ELE-00-003 173 bp View
JN946345.1 nt Mus musculus targeted KO-first, con... 36480 bp Mus musculus QL-ELE-00-003 173 bp View
JN946346.1 nt Mus musculus targeted KO-first, con... 38466 bp Mus musculus QL-ELE-00-003 173 bp View
JN946347.1 nt Mus musculus targeted non-condition... 37999 bp Mus musculus QL-ELE-00-003 173 bp View
JN946348.1 nt Mus musculus targeted KO-first, con... 40494 bp Mus musculus QL-ELE-00-003 173 bp View
JN946349.1 nt Mus musculus targeted KO-first, con... 36492 bp Mus musculus QL-ELE-00-003 173 bp View
JN946350.1 nt Mus musculus targeted KO-first, con... 38109 bp Mus musculus QL-ELE-00-003 173 bp View
JN946351.1 nt Mus musculus targeted KO-first, con... 38088 bp Mus musculus QL-ELE-00-003 173 bp View
JN946352.1 nt Mus musculus targeted non-condition... 38040 bp Mus musculus QL-ELE-00-003 173 bp View
JN946353.1 nt Mus musculus targeted non-condition... 38625 bp Mus musculus QL-ELE-00-003 173 bp View
JN946354.1 nt Mus musculus targeted KO-first, con... 36474 bp Mus musculus QL-ELE-00-003 173 bp View
JN948760.1 emblreltgn Mus musculus targeted non-condition... 38044 bp Mus musculus QL-ELE-00-003 173 bp View
JN946355.1 nt Mus musculus targeted KO-first, con... 38099 bp Mus musculus QL-ELE-00-003 173 bp View
JN946356.1 nt Mus musculus targeted KO-first, con... 40670 bp Mus musculus QL-ELE-00-003 173 bp View
JN946357.1 nt Mus musculus targeted non-condition... 40077 bp Mus musculus QL-ELE-00-003 173 bp View
JN946358.1 nt Mus musculus targeted KO-first, con... 38655 bp Mus musculus QL-ELE-00-003 173 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-003 173 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.