Amplicon details

Amplicon:

173 bp
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JN946134.1 nt Mus musculus targeted KO-first, con... 38395 bp Mus musculus QL-ELE-00-003 173 bp View
JN946135.1 nt Mus musculus targeted KO-first, con... 38061 bp Mus musculus QL-ELE-00-003 173 bp View
JN946136.1 nt Mus musculus targeted non-condition... 38176 bp Mus musculus QL-ELE-00-003 173 bp View
JN946137.1 nt Mus musculus targeted non-condition... 38219 bp Mus musculus QL-ELE-00-003 173 bp View
JN946138.1 nt Mus musculus targeted non-condition... 38617 bp Mus musculus QL-ELE-00-003 173 bp View
JN946139.1 nt Mus musculus targeted non-condition... 40293 bp Mus musculus QL-ELE-00-003 173 bp View
JN946140.1 nt Mus musculus targeted KO-first, con... 38722 bp Mus musculus QL-ELE-00-003 173 bp View
JN946141.1 nt Mus musculus targeted deletion, lac... 37222 bp Mus musculus QL-ELE-00-003 173 bp View
JN946142.1 nt Mus musculus targeted KO-first, con... 38135 bp Mus musculus QL-ELE-00-003 173 bp View
JN948745.1 emblreltgn Mus musculus targeted non-condition... 38655 bp Mus musculus QL-ELE-00-003 173 bp View
JN946143.1 nt Mus musculus targeted non-condition... 38216 bp Mus musculus QL-ELE-00-003 173 bp View
JN946144.1 nt Mus musculus targeted non-condition... 38018 bp Mus musculus QL-ELE-00-003 173 bp View
JN946145.1 nt Mus musculus targeted non-condition... 38014 bp Mus musculus QL-ELE-00-003 173 bp View
JN946146.1 nt Mus musculus targeted KO-first, con... 38112 bp Mus musculus QL-ELE-00-003 173 bp View
JN946147.1 nt Mus musculus targeted non-condition... 36604 bp Mus musculus QL-ELE-00-003 173 bp View
JN946148.1 nt Mus musculus targeted KO-first, con... 39398 bp Mus musculus QL-ELE-00-003 173 bp View
JN946149.1 nt Mus musculus targeted KO-first, con... 38308 bp Mus musculus QL-ELE-00-003 173 bp View
JN946150.1 nt Mus musculus targeted non-condition... 39147 bp Mus musculus QL-ELE-00-003 173 bp View
JN946151.1 nt Mus musculus targeted KO-first, con... 39312 bp Mus musculus QL-ELE-00-003 173 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-003 173 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.