European Commission logo
Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 173 bp 
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JN946115.1 nt Mus musculus targeted KO-first, con... 39745 bp Mus musculus QL-ELE-00-003 173 bp View
JN946116.1 nt Mus musculus targeted KO-first, con... 38069 bp Mus musculus QL-ELE-00-003 173 bp View
JN946117.1 nt Mus musculus targeted non-condition... 38032 bp Mus musculus QL-ELE-00-003 173 bp View
JN946118.1 nt Mus musculus targeted KO-first, con... 39978 bp Mus musculus QL-ELE-00-003 173 bp View
JN946119.1 nt Mus musculus targeted non-condition... 37996 bp Mus musculus QL-ELE-00-003 173 bp View
JN946120.1 nt Mus musculus targeted KO-first, con... 38512 bp Mus musculus QL-ELE-00-003 173 bp View
JN946121.1 nt Mus musculus targeted non-condition... 38505 bp Mus musculus QL-ELE-00-003 173 bp View
JN948744.1 emblreltgn Mus musculus targeted non-condition... 38063 bp Mus musculus QL-ELE-00-003 173 bp View
JN946122.1 nt Mus musculus targeted KO-first, con... 38449 bp Mus musculus QL-ELE-00-003 173 bp View
JN946123.1 nt Mus musculus targeted KO-first, con... 37921 bp Mus musculus QL-ELE-00-003 173 bp View
JN946124.1 nt Mus musculus targeted KO-first, con... 36324 bp Mus musculus QL-ELE-00-003 173 bp View
JN946125.1 nt Mus musculus targeted non-condition... 38036 bp Mus musculus QL-ELE-00-003 173 bp View
JN946126.1 nt Mus musculus targeted KO-first, con... 38089 bp Mus musculus QL-ELE-00-003 173 bp View
JN946127.1 nt Mus musculus targeted KO-first, con... 38002 bp Mus musculus QL-ELE-00-003 173 bp View
JN946128.1 nt Mus musculus targeted KO-first, con... 38649 bp Mus musculus QL-ELE-00-003 173 bp View
JN946129.1 nt Mus musculus targeted non-condition... 37957 bp Mus musculus QL-ELE-00-003 173 bp View
JN946130.1 nt Mus musculus targeted KO-first, con... 40248 bp Mus musculus QL-ELE-00-003 173 bp View
JN946131.1 nt Mus musculus targeted non-condition... 40265 bp Mus musculus QL-ELE-00-003 173 bp View
JN946132.1 nt Mus musculus targeted deletion, lac... 37222 bp Mus musculus QL-ELE-00-003 173 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-003 173 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.