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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 173 bp 
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JN948740.1 emblreltgn Mus musculus targeted non-condition... 39926 bp Mus musculus QL-ELE-00-003 173 bp View
JN946059.1 nt Mus musculus targeted non-condition... 38047 bp Mus musculus QL-ELE-00-003 173 bp View
JN946060.1 nt Mus musculus targeted KO-first, con... 38078 bp Mus musculus QL-ELE-00-003 173 bp View
JN946061.1 nt Mus musculus targeted KO-first, con... 38666 bp Mus musculus QL-ELE-00-003 173 bp View
JN946062.1 nt Mus musculus targeted non-condition... 39269 bp Mus musculus QL-ELE-00-003 173 bp View
JN946063.1 nt Mus musculus targeted KO-first, con... 38013 bp Mus musculus QL-ELE-00-003 173 bp View
JN946064.1 nt Mus musculus targeted KO-first, con... 37986 bp Mus musculus QL-ELE-00-003 173 bp View
JN946065.1 nt Mus musculus targeted deletion, lac... 37222 bp Mus musculus QL-ELE-00-003 173 bp View
JN946066.1 nt Mus musculus targeted KO-first, con... 36479 bp Mus musculus QL-ELE-00-003 173 bp View
JN946067.1 nt Mus musculus targeted KO-first, con... 39514 bp Mus musculus QL-ELE-00-003 173 bp View
JN946068.1 nt Mus musculus targeted non-condition... 39683 bp Mus musculus QL-ELE-00-003 173 bp View
JN946069.1 nt Mus musculus targeted non-condition... 38762 bp Mus musculus QL-ELE-00-003 173 bp View
JN946070.1 nt Mus musculus targeted KO-first, con... 39863 bp Mus musculus QL-ELE-00-003 173 bp View
JN946071.1 nt Mus musculus targeted KO-first, con... 40030 bp Mus musculus QL-ELE-00-003 173 bp View
JN946072.1 nt Mus musculus targeted non-condition... 38525 bp Mus musculus QL-ELE-00-003 173 bp View
JN948741.1 emblreltgn Mus musculus targeted non-condition... 40507 bp Mus musculus QL-ELE-00-003 173 bp View
JN946073.1 nt Mus musculus targeted KO-first, con... 38105 bp Mus musculus QL-ELE-00-003 173 bp View
JN946074.1 nt Mus musculus targeted KO-first, con... 38366 bp Mus musculus QL-ELE-00-003 173 bp View
JN946075.1 nt Mus musculus targeted KO-first, con... 36508 bp Mus musculus QL-ELE-00-003 173 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-003 173 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.