Amplicon details

Amplicon:

173 bp
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JN945834.1 nt Mus musculus targeted KO-first, con... 38085 bp Mus musculus QL-ELE-00-003 173 bp View
JN945835.1 nt Mus musculus targeted KO-first, con... 38083 bp Mus musculus QL-ELE-00-003 173 bp View
JN945836.1 nt Mus musculus targeted non-condition... 36766 bp Mus musculus QL-ELE-00-003 173 bp View
JN945837.1 nt Mus musculus targeted non-condition... 38019 bp Mus musculus QL-ELE-00-003 173 bp View
JN945838.1 nt Mus musculus targeted KO-first, con... 37987 bp Mus musculus QL-ELE-00-003 173 bp View
JN945839.1 nt Mus musculus targeted KO-first, con... 37985 bp Mus musculus QL-ELE-00-003 173 bp View
JN945840.1 nt Mus musculus targeted non-condition... 38036 bp Mus musculus QL-ELE-00-003 173 bp View
JN945841.1 nt Mus musculus targeted non-condition... 37943 bp Mus musculus QL-ELE-00-003 173 bp View
JN948725.1 emblreltgn Mus musculus targeted non-condition... 38611 bp Mus musculus QL-ELE-00-003 173 bp View
JN945842.1 nt Mus musculus targeted non-condition... 36397 bp Mus musculus QL-ELE-00-003 173 bp View
JN945843.1 nt Mus musculus targeted KO-first, con... 38439 bp Mus musculus QL-ELE-00-003 173 bp View
JN945844.1 nt Mus musculus targeted KO-first, con... 37990 bp Mus musculus QL-ELE-00-003 173 bp View
JN945845.1 nt Mus musculus targeted non-condition... 37723 bp Mus musculus QL-ELE-00-003 173 bp View
JN945846.1 nt Mus musculus targeted KO-first, con... 38922 bp Mus musculus QL-ELE-00-003 173 bp View
JN945847.1 nt Mus musculus targeted KO-first, con... 37958 bp Mus musculus QL-ELE-00-003 173 bp View
JN945848.1 nt Mus musculus targeted KO-first, con... 37916 bp Mus musculus QL-ELE-00-003 173 bp View
JN945849.1 nt Mus musculus targeted KO-first, con... 39576 bp Mus musculus QL-ELE-00-003 173 bp View
JN945850.1 nt Mus musculus targeted non-condition... 39656 bp Mus musculus QL-ELE-00-003 173 bp View
JN945851.1 nt Mus musculus targeted deletion, lac... 37222 bp Mus musculus QL-ELE-00-003 173 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-003 173 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.