Amplicon details

Amplicon:

173 bp
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JN945587.1 nt Mus musculus targeted non-condition... 37986 bp Mus musculus QL-ELE-00-003 173 bp View
JN945588.1 nt Mus musculus targeted KO-first, con... 38160 bp Mus musculus QL-ELE-00-003 173 bp View
JN945589.1 nt Mus musculus targeted KO-first, con... 38357 bp Mus musculus QL-ELE-00-003 173 bp View
JN948707.1 emblreltgn Mus musculus targeted non-condition... 38009 bp Mus musculus QL-ELE-00-003 173 bp View
JN945591.1 nt Mus musculus targeted KO-first, con... 38023 bp Mus musculus QL-ELE-00-003 173 bp View
JN945592.1 nt Mus musculus targeted non-condition... 36452 bp Mus musculus QL-ELE-00-003 173 bp View
JN945593.1 nt Mus musculus targeted KO-first, con... 38745 bp Mus musculus QL-ELE-00-003 173 bp View
JN945594.1 nt Mus musculus targeted KO-first, con... 37896 bp Mus musculus QL-ELE-00-003 173 bp View
JN945595.1 nt Mus musculus targeted non-condition... 36770 bp Mus musculus QL-ELE-00-003 173 bp View
JN945596.1 nt Mus musculus targeted non-condition... 38171 bp Mus musculus QL-ELE-00-003 173 bp View
JN945598.1 nt Mus musculus targeted KO-first, con... 38144 bp Mus musculus QL-ELE-00-003 173 bp View
JN945599.1 nt Mus musculus targeted non-condition... 38140 bp Mus musculus QL-ELE-00-003 173 bp View
JN945600.1 nt Mus musculus targeted KO-first, con... 36643 bp Mus musculus QL-ELE-00-003 173 bp View
JN945601.1 nt Mus musculus targeted non-condition... 36619 bp Mus musculus QL-ELE-00-003 173 bp View
JN945602.1 nt Mus musculus targeted KO-first, con... 38651 bp Mus musculus QL-ELE-00-003 173 bp View
JN945603.1 nt Mus musculus targeted non-condition... 36506 bp Mus musculus QL-ELE-00-003 173 bp View
JN948708.1 emblreltgn Mus musculus targeted non-condition... 38091 bp Mus musculus QL-ELE-00-003 173 bp View
JN945605.1 nt Mus musculus targeted KO-first, con... 38047 bp Mus musculus QL-ELE-00-003 173 bp View
JN945606.1 nt Mus musculus targeted non-condition... 38062 bp Mus musculus QL-ELE-00-003 173 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-003 173 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.