European Commission logo
Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 173 bp 
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JN945501.1 nt Mus musculus targeted non-condition... 38273 bp Mus musculus QL-ELE-00-003 173 bp View
JN945502.1 nt Mus musculus targeted KO-first, con... 38143 bp Mus musculus QL-ELE-00-003 173 bp View
JN945503.1 nt Mus musculus targeted deletion, lac... 37222 bp Mus musculus QL-ELE-00-003 173 bp View
JN945504.1 nt Mus musculus targeted non-condition... 38268 bp Mus musculus QL-ELE-00-003 173 bp View
JN945505.1 nt Mus musculus targeted KO-first, con... 38454 bp Mus musculus QL-ELE-00-003 173 bp View
JN948701.1 emblreltgn Mus musculus targeted KO-first, con... 38442 bp Mus musculus QL-ELE-00-003 173 bp View
JN945507.1 nt Mus musculus targeted KO-first, con... 38108 bp Mus musculus QL-ELE-00-003 173 bp View
JN945508.1 nt Mus musculus targeted deletion, lac... 37222 bp Mus musculus QL-ELE-00-003 173 bp View
JN945509.1 nt Mus musculus targeted KO-first, con... 38098 bp Mus musculus QL-ELE-00-003 173 bp View
JN945510.1 nt Mus musculus targeted non-condition... 40633 bp Mus musculus QL-ELE-00-003 173 bp View
JN945511.1 nt Mus musculus targeted KO-first, con... 37960 bp Mus musculus QL-ELE-00-003 173 bp View
JN945512.1 nt Mus musculus targeted non-condition... 38015 bp Mus musculus QL-ELE-00-003 173 bp View
JN945514.1 nt Mus musculus targeted non-condition... 38558 bp Mus musculus QL-ELE-00-003 173 bp View
JN945515.1 nt Mus musculus targeted KO-first, con... 38440 bp Mus musculus QL-ELE-00-003 173 bp View
JN945516.1 nt Mus musculus targeted KO-first, con... 36286 bp Mus musculus QL-ELE-00-003 173 bp View
JN945517.1 nt Mus musculus targeted KO-first, con... 41273 bp Mus musculus QL-ELE-00-003 173 bp View
JN945518.1 nt Mus musculus targeted KO-first, con... 38728 bp Mus musculus QL-ELE-00-003 173 bp View
JN945519.1 nt Mus musculus targeted non-condition... 38385 bp Mus musculus QL-ELE-00-003 173 bp View
JN948702.1 emblreltgn Mus musculus targeted KO-first, con... 40664 bp Mus musculus QL-ELE-00-003 173 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-003 173 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.