Amplicon details

Amplicon:

173 bp
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JN945392.1 nt Mus musculus targeted KO-first, con... 38021 bp Mus musculus QL-ELE-00-003 173 bp View
JN948693.1 emblreltgn Mus musculus targeted non-condition... 39890 bp Mus musculus QL-ELE-00-003 173 bp View
JN945394.1 nt Mus musculus targeted non-condition... 40351 bp Mus musculus QL-ELE-00-003 173 bp View
JN945395.1 nt Mus musculus targeted non-condition... 38124 bp Mus musculus QL-ELE-00-003 173 bp View
JN945396.1 nt Mus musculus targeted KO-first, con... 39159 bp Mus musculus QL-ELE-00-003 173 bp View
JN945397.1 nt Mus musculus targeted KO-first, con... 37925 bp Mus musculus QL-ELE-00-003 173 bp View
JN945398.1 nt Mus musculus targeted non-condition... 38022 bp Mus musculus QL-ELE-00-003 173 bp View
JN945399.1 nt Mus musculus targeted KO-first, con... 37982 bp Mus musculus QL-ELE-00-003 173 bp View
JN945401.1 nt Mus musculus targeted KO-first, con... 40664 bp Mus musculus QL-ELE-00-003 173 bp View
JN945402.1 nt Mus musculus targeted non-condition... 38035 bp Mus musculus QL-ELE-00-003 173 bp View
JN945403.1 nt Mus musculus targeted KO-first, con... 37915 bp Mus musculus QL-ELE-00-003 173 bp View
JN945404.1 nt Mus musculus targeted non-condition... 40285 bp Mus musculus QL-ELE-00-003 173 bp View
JN945405.1 nt Mus musculus targeted deletion, lac... 37222 bp Mus musculus QL-ELE-00-003 173 bp View
JN945406.1 nt Mus musculus targeted non-condition... 36407 bp Mus musculus QL-ELE-00-003 173 bp View
JN948694.1 emblreltgn Mus musculus targeted KO-first, con... 39131 bp Mus musculus QL-ELE-00-003 173 bp View
JN945408.1 nt Mus musculus targeted non-condition... 38026 bp Mus musculus QL-ELE-00-003 173 bp View
JN945409.1 nt Mus musculus targeted KO-first, con... 36548 bp Mus musculus QL-ELE-00-003 173 bp View
JN945410.1 nt Mus musculus targeted deletion, lac... 37222 bp Mus musculus QL-ELE-00-003 173 bp View
JN945411.1 nt Mus musculus targeted KO-first, con... 37973 bp Mus musculus QL-ELE-00-003 173 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-003 173 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.