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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 173 bp 
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JN945370.1 nt Mus musculus targeted KO-first, con... 37951 bp Mus musculus QL-ELE-00-003 173 bp View
JN945371.1 nt Mus musculus targeted KO-first, con... 38070 bp Mus musculus QL-ELE-00-003 173 bp View
JN945373.1 nt Mus musculus targeted KO-first, con... 38378 bp Mus musculus QL-ELE-00-003 173 bp View
JN945374.1 nt Mus musculus targeted KO-first, con... 37993 bp Mus musculus QL-ELE-00-003 173 bp View
JN945375.1 nt Mus musculus targeted non-condition... 37927 bp Mus musculus QL-ELE-00-003 173 bp View
JN945376.1 nt Mus musculus targeted KO-first, con... 40524 bp Mus musculus QL-ELE-00-003 173 bp View
JN945377.1 nt Mus musculus targeted non-condition... 39168 bp Mus musculus QL-ELE-00-003 173 bp View
JN945378.1 nt Mus musculus targeted KO-first, con... 36479 bp Mus musculus QL-ELE-00-003 173 bp View
JN948692.1 emblreltgn Mus musculus targeted KO-first, con... 38049 bp Mus musculus QL-ELE-00-003 173 bp View
JN945380.1 nt Mus musculus targeted KO-first, con... 38057 bp Mus musculus QL-ELE-00-003 173 bp View
JN945381.1 nt Mus musculus targeted non-condition... 38149 bp Mus musculus QL-ELE-00-003 173 bp View
JN945382.1 nt Mus musculus targeted non-condition... 38021 bp Mus musculus QL-ELE-00-003 173 bp View
JN945383.1 nt Mus musculus targeted KO-first, con... 39970 bp Mus musculus QL-ELE-00-003 173 bp View
JN945384.1 nt Mus musculus targeted KO-first, con... 38025 bp Mus musculus QL-ELE-00-003 173 bp View
JN945385.1 nt Mus musculus targeted KO-first, con... 38050 bp Mus musculus QL-ELE-00-003 173 bp View
JN945387.1 nt Mus musculus targeted KO-first, con... 39232 bp Mus musculus QL-ELE-00-003 173 bp View
JN945388.1 nt Mus musculus targeted non-condition... 37244 bp Mus musculus QL-ELE-00-003 173 bp View
JN945389.1 nt Mus musculus targeted non-condition... 37952 bp Mus musculus QL-ELE-00-003 173 bp View
JN945390.1 nt Mus musculus targeted KO-first, con... 39284 bp Mus musculus QL-ELE-00-003 173 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-003 173 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.