European Commission logo
Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 173 bp 
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JN945283.1 nt Mus musculus targeted non-condition... 40593 bp Mus musculus QL-ELE-00-003 173 bp View
JN945284.1 nt Mus musculus targeted KO-first, con... 36681 bp Mus musculus QL-ELE-00-003 173 bp View
JN945285.1 nt Mus musculus targeted KO-first, con... 39281 bp Mus musculus QL-ELE-00-003 173 bp View
JN945286.1 nt Mus musculus targeted non-condition... 38015 bp Mus musculus QL-ELE-00-003 173 bp View
JN945288.1 nt Mus musculus targeted KO-first, con... 38275 bp Mus musculus QL-ELE-00-003 173 bp View
JN945289.1 nt Mus musculus targeted non-condition... 38254 bp Mus musculus QL-ELE-00-003 173 bp View
JN945290.1 nt Mus musculus targeted non-condition... 39039 bp Mus musculus QL-ELE-00-003 173 bp View
JN945291.1 nt Mus musculus targeted KO-first, con... 37907 bp Mus musculus QL-ELE-00-003 173 bp View
JN945292.1 nt Mus musculus targeted KO-first, con... 38502 bp Mus musculus QL-ELE-00-003 173 bp View
JN945293.1 nt Mus musculus targeted KO-first, con... 38434 bp Mus musculus QL-ELE-00-003 173 bp View
JN948686.1 emblreltgn Mus musculus targeted non-condition... 37950 bp Mus musculus QL-ELE-00-003 173 bp View
JN945295.1 nt Mus musculus targeted non-condition... 40816 bp Mus musculus QL-ELE-00-003 173 bp View
JN945296.1 nt Mus musculus targeted KO-first, con... 41234 bp Mus musculus QL-ELE-00-003 173 bp View
JN945297.1 nt Mus musculus targeted KO-first, con... 38434 bp Mus musculus QL-ELE-00-003 173 bp View
JN945298.1 nt Mus musculus targeted KO-first, con... 40287 bp Mus musculus QL-ELE-00-003 173 bp View
JN945300.1 nt Mus musculus targeted non-condition... 40224 bp Mus musculus QL-ELE-00-003 173 bp View
JN945301.1 nt Mus musculus targeted KO-first, con... 41006 bp Mus musculus QL-ELE-00-003 173 bp View
JN945303.1 nt Mus musculus targeted KO-first, con... 38495 bp Mus musculus QL-ELE-00-003 173 bp View
JN945304.1 nt Mus musculus targeted KO-first, con... 38403 bp Mus musculus QL-ELE-00-003 173 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-003 173 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.