Amplicon details

Amplicon:

173 bp
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JN945240.1 nt Mus musculus targeted deletion, lac... 37222 bp Mus musculus QL-ELE-00-003 173 bp View
JN945241.1 nt Mus musculus targeted KO-first, con... 36236 bp Mus musculus QL-ELE-00-003 173 bp View
JN945242.1 nt Mus musculus targeted non-condition... 36229 bp Mus musculus QL-ELE-00-003 173 bp View
JN945243.1 nt Mus musculus targeted non-condition... 38322 bp Mus musculus QL-ELE-00-003 173 bp View
JN945244.1 nt Mus musculus targeted KO-first, con... 38223 bp Mus musculus QL-ELE-00-003 173 bp View
JN945246.1 nt Mus musculus targeted non-condition... 37963 bp Mus musculus QL-ELE-00-003 173 bp View
JN945247.1 nt Mus musculus targeted non-condition... 39955 bp Mus musculus QL-ELE-00-003 173 bp View
JN945248.1 nt Mus musculus targeted KO-first, con... 38711 bp Mus musculus QL-ELE-00-003 173 bp View
JN945249.1 nt Mus musculus targeted KO-first, con... 37960 bp Mus musculus QL-ELE-00-003 173 bp View
JN945250.1 nt Mus musculus targeted non-condition... 38111 bp Mus musculus QL-ELE-00-003 173 bp View
JN945251.1 nt Mus musculus targeted KO-first, con... 38710 bp Mus musculus QL-ELE-00-003 173 bp View
JN948683.1 emblreltgn Mus musculus targeted non-condition... 38372 bp Mus musculus QL-ELE-00-003 173 bp View
JN945253.1 nt Mus musculus targeted deletion, lac... 37222 bp Mus musculus QL-ELE-00-003 173 bp View
JN945254.1 nt Mus musculus targeted KO-first, con... 38440 bp Mus musculus QL-ELE-00-003 173 bp View
JN945255.1 nt Mus musculus targeted KO-first, con... 37963 bp Mus musculus QL-ELE-00-003 173 bp View
JN945256.1 nt Mus musculus targeted KO-first, con... 39250 bp Mus musculus QL-ELE-00-003 173 bp View
JN945257.1 nt Mus musculus targeted non-condition... 39226 bp Mus musculus QL-ELE-00-003 173 bp View
JN945258.1 nt Mus musculus targeted KO-first, con... 37896 bp Mus musculus QL-ELE-00-003 173 bp View
JN945260.1 nt Mus musculus targeted non-condition... 38086 bp Mus musculus QL-ELE-00-003 173 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-003 173 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.