European Commission logo
Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 173 bp 
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JN945068.1 nt Mus musculus targeted KO-first, con... 37897 bp Mus musculus QL-ELE-00-003 173 bp View
JN945069.1 nt Mus musculus targeted KO-first, con... 38740 bp Mus musculus QL-ELE-00-003 173 bp View
JN948670.1 emblreltgn Mus musculus targeted non-condition... 37797 bp Mus musculus QL-ELE-00-003 173 bp View
JN945071.1 nt Mus musculus targeted non-condition... 37978 bp Mus musculus QL-ELE-00-003 173 bp View
JN945072.1 nt Mus musculus targeted KO-first, con... 38255 bp Mus musculus QL-ELE-00-003 173 bp View
JN945073.1 nt Mus musculus targeted KO-first, con... 38473 bp Mus musculus QL-ELE-00-003 173 bp View
JN945074.1 nt Mus musculus targeted KO-first, con... 37971 bp Mus musculus QL-ELE-00-003 173 bp View
JN945075.1 nt Mus musculus targeted KO-first, con... 38195 bp Mus musculus QL-ELE-00-003 173 bp View
JN945076.1 nt Mus musculus targeted KO-first, con... 38411 bp Mus musculus QL-ELE-00-003 173 bp View
JN945078.1 nt Mus musculus targeted KO-first, con... 38036 bp Mus musculus QL-ELE-00-003 173 bp View
JN945079.1 nt Mus musculus targeted non-condition... 37938 bp Mus musculus QL-ELE-00-003 173 bp View
JN945080.1 nt Mus musculus targeted non-condition... 38401 bp Mus musculus QL-ELE-00-003 173 bp View
JN945081.1 nt Mus musculus targeted KO-first, con... 37842 bp Mus musculus QL-ELE-00-003 173 bp View
JN945082.1 nt Mus musculus targeted KO-first, con... 40487 bp Mus musculus QL-ELE-00-003 173 bp View
JN945083.1 nt Mus musculus targeted non-condition... 40493 bp Mus musculus QL-ELE-00-003 173 bp View
JN948671.1 emblreltgn Mus musculus targeted KO-first, con... 37984 bp Mus musculus QL-ELE-00-003 173 bp View
JN945085.1 nt Mus musculus targeted non-condition... 38003 bp Mus musculus QL-ELE-00-003 173 bp View
JN945086.1 nt Mus musculus targeted KO-first, con... 39727 bp Mus musculus QL-ELE-00-003 173 bp View
JN945087.1 nt Mus musculus targeted non-condition... 39764 bp Mus musculus QL-ELE-00-003 173 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-003 173 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.