Amplicon details

Amplicon:

173 bp
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JN944981.1 nt Mus musculus targeted KO-first, con... 38413 bp Mus musculus QL-ELE-00-003 173 bp View
JN944982.1 nt Mus musculus targeted KO-first, con... 36620 bp Mus musculus QL-ELE-00-003 173 bp View
JN944983.1 nt Mus musculus targeted KO-first, con... 38044 bp Mus musculus QL-ELE-00-003 173 bp View
JN944984.1 nt Mus musculus targeted non-condition... 37991 bp Mus musculus QL-ELE-00-003 173 bp View
JN948664.1 emblreltgn Mus musculus targeted non-condition... 39677 bp Mus musculus QL-ELE-00-003 173 bp View
JN944986.1 nt Mus musculus targeted non-condition... 37948 bp Mus musculus QL-ELE-00-003 173 bp View
JN944987.1 nt Mus musculus targeted KO-first, con... 38655 bp Mus musculus QL-ELE-00-003 173 bp View
JN944988.1 nt Mus musculus targeted KO-first, con... 39286 bp Mus musculus QL-ELE-00-003 173 bp View
JN944989.1 nt Mus musculus targeted non-condition... 37980 bp Mus musculus QL-ELE-00-003 173 bp View
JN944990.1 nt Mus musculus targeted non-condition... 39889 bp Mus musculus QL-ELE-00-003 173 bp View
JN944991.1 nt Mus musculus targeted non-condition... 39078 bp Mus musculus QL-ELE-00-003 173 bp View
JN944993.1 nt Mus musculus targeted non-condition... 38315 bp Mus musculus QL-ELE-00-003 173 bp View
JN944994.1 nt Mus musculus targeted KO-first, con... 38146 bp Mus musculus QL-ELE-00-003 173 bp View
JN944995.1 nt Mus musculus targeted non-condition... 38316 bp Mus musculus QL-ELE-00-003 173 bp View
JN944996.1 nt Mus musculus targeted KO-first, con... 37920 bp Mus musculus QL-ELE-00-003 173 bp View
JN944997.1 nt Mus musculus targeted KO-first, con... 38047 bp Mus musculus QL-ELE-00-003 173 bp View
JN944998.1 nt Mus musculus targeted KO-first, con... 37927 bp Mus musculus QL-ELE-00-003 173 bp View
JN948665.1 emblreltgn Mus musculus targeted non-condition... 37998 bp Mus musculus QL-ELE-00-003 173 bp View
JN945000.1 nt Mus musculus targeted KO-first, con... 37801 bp Mus musculus QL-ELE-00-003 173 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-003 173 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.