Amplicon details

Amplicon:

173 bp
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JN387044.1 nt Recombination vector pAdHTS, comple... 34579 bp Recombination vector pAdHTS QL-ELE-00-003 173 bp View
HQ683721.1 nt Deletion homozygosity selection vec... 12412 bp Deletion homozygosity selection vector 1 QL-ELE-00-003 173 bp View
HQ683722.1 nt Cloning vector TNN, complete sequence. 8907 bp Cloning vector TNN QL-ELE-00-003 173 bp View
HM771696.1 nt Cloning vector EN.Cherry, complete ... 10649 bp Cloning vector EN.Cherry QL-ELE-00-003 173 bp View
HM771697.1 nt Cloning vector EN.GFP, complete seq... 10655 bp Cloning vector EN.GFP QL-ELE-00-003 173 bp View
HM771698.1 nt Cloning vector EN.CFP, complete seq... 10658 bp Cloning vector EN.CFP QL-ELE-00-003 173 bp View
HM771699.1 nt Cloning vector EN.YFP, complete seq... 10658 bp Cloning vector EN.YFP QL-ELE-00-003 173 bp View
HM771700.1 nt Cloning vector EN.Apple, complete s... 10649 bp Cloning vector EN.Apple QL-ELE-00-003 173 bp View
HM771701.1 nt Cloning vector NonEN.CFP, complete ... 10607 bp Cloning vector NonEN.CFP QL-ELE-00-003 173 bp View
HM771702.1 nt Cloning vector EN.CFP.bGbpA, comple... 10298 bp Cloning vector EN.CFP.bGbpA QL-ELE-00-003 173 bp View
HM771703.1 nt Cloning vector EN.CFP.SV40, complet... 9966 bp Cloning vector EN.CFP.SV40 QL-ELE-00-003 173 bp View
JN122283.1 nt Flexi vector pFC27A HaloTag CMV-neo... 6524 bp Flexi vector pFC27A HaloTag CMV-neo QL-ELE-00-003 173 bp View
JN122284.1 nt Flexi vector pFC27K HaloTag CMV-neo... 5527 bp Flexi vector pFC27K HaloTag CMV-neo QL-ELE-00-003 173 bp View
JN129497.1 nt Flexi vector pFN28A HaloTag(R) CMV-... 6532 bp Flexi vector pFN28A HaloTag(R) CMV-neo QL-ELE-00-003 173 bp View
JN129498.1 nt Flexi vector pFN28K HaloTag(R) CMV-... 5535 bp Flexi vector pFN28K HaloTag(R) CMV-neo QL-ELE-00-003 173 bp View
JN204880.1 nt Biobrick cloning vector BBa_J96011,... 3988 bp Biobrick cloning vector BBa_J96011 QL-ELE-00-003 173 bp View
JN255744.1 nt Synthetic construct, complete sequence. 200728 bp synthetic construct QL-ELE-00-003 173 bp View
JN000001.1 nt Expression vector pLNHX_cHS4_650, c... 5956 bp Expression vector pLNHX_cHS4_650 QL-ELE-00-003 173 bp View
JF804976.1 nt Gene trapping and targeting vector ... 800 bp Gene trapping and targeting vector pLTM330 QL-ELE-00-003 173 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-003 173 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.