Amplicon details

Amplicon:

173 bp
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JF796096.1 nt Reporter gene-fusion vector pFU69, ... 2843 bp Reporter gene-fusion vector pFU69 QL-ELE-00-003 173 bp View
HQ698851.1 nt Cloning vector pSOL8DCL2, complete ... 10231 bp Cloning vector pSOL8DCL2 QL-ELE-00-003 173 bp View
HQ698852.1 nt Cloning vector pSOL9CAP, complete s... 9182 bp Cloning vector pSOL9CAP QL-ELE-00-003 173 bp View
HQ698853.1 nt Cloning vector pSOL8DC3, complete s... 10836 bp Cloning vector pSOL8DC3 QL-ELE-00-003 173 bp View
HQ699533.1 nt Cloning vector pCASP1::NLS:GFP:GUS,... 12379 bp Cloning vector pCASP1::NLS:GFP:GUS QL-ELE-00-003 173 bp View
HQ699534.1 nt Cloning vector pCASP2::NLS:GFP:GUS,... 11882 bp Cloning vector pCASP2::NLS:GFP:GUS QL-ELE-00-003 173 bp View
HQ699536.1 nt Cloning vector pCASP5::CASP5:GFP, c... 11043 bp Cloning vector pCASP5::CASP5:GFP QL-ELE-00-003 173 bp View
HQ699537.1 nt Cloning vector pCASP1::CASP1:GFP, c... 11470 bp Cloning vector pCASP1::CASP1:GFP QL-ELE-00-003 173 bp View
HQ699538.1 nt Cloning vector pCASP3::CASP3:GFP, c... 11383 bp Cloning vector pCASP3::CASP3:GFP QL-ELE-00-003 173 bp View
HQ699539.1 nt Cloning vector pCASP2::CASP2:GFP, c... 10842 bp Cloning vector pCASP2::CASP2:GFP QL-ELE-00-003 173 bp View
HQ699540.1 nt Cloning vector p35S::CASP4:GFP, com... 11039 bp Cloning vector p35S::CASP4:GFP QL-ELE-00-003 173 bp View
HQ699541.1 nt Cloning vector p35S::CASP5:GFP, com... 11008 bp Cloning vector p35S::CASP5:GFP QL-ELE-00-003 173 bp View
HQ699542.1 nt Cloning vector p35S::CASP1:GFP, com... 11181 bp Cloning vector p35S::CASP1:GFP QL-ELE-00-003 173 bp View
HQ699543.1 nt Cloning vector p35S::CASP3:GFP, com... 11533 bp Cloning vector p35S::CASP3:GFP QL-ELE-00-003 173 bp View
HQ699544.1 nt Cloning vector p35S::CASP2:GFP, com... 11046 bp Cloning vector p35S::CASP2:GFP QL-ELE-00-003 173 bp View
HQ699545.1 nt Cloning vector pCASP1::CASP1:mTurqu... 11150 bp Cloning vector pCASP1::CASP1:mTurquoise QL-ELE-00-003 173 bp View
HQ416708.1 nt Cloning vector pEGFP-N2-NRSE4x-ohne... 4237 bp Cloning vector pEGFP-N2-NRSE4x-ohne-CMV QL-ELE-00-003 173 bp View
JN128952.1 nt Shuttle vector pSC-R1LambdaR2, comp... 8092 bp Shuttle vector pSC-R1LambdaR2 QL-ELE-00-003 173 bp View
JN195814.1 nt Cloning vector pHPmK3, complete seq... 4908 bp Cloning vector pHPmK3 QL-ELE-00-003 173 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-003 173 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.