Amplicon details

Amplicon:

173 bp
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JN947771.1 nt Mus musculus targeted non-condition... 40033 bp Mus musculus QL-ELE-00-003 173 bp View
GQ870263.1 nt Plant RNAi vector pRNAi-LIC, comple... 12097 bp Plant RNAi vector pRNAi-LIC QL-ELE-00-003 173 bp View
JN947772.1 nt Mus musculus targeted non-condition... 38802 bp Mus musculus QL-ELE-00-003 173 bp View
HM049176.1 nt Promoter probe vector pEvoGlowRed, ... 7817 bp Promoter probe vector pEvoGlowRed QL-ELE-00-003 173 bp View
HM049177.1 nt Mariner mini-transposon delivery ve... 8170 bp Mariner mini-transposon delivery vector pMaGlowRedKm QL-ELE-00-003 173 bp View
HM049178.1 nt Mariner mini-transposon delivery ve... 7071 bp Mariner mini-transposon delivery vector pMaTcGlow QL-ELE-00-003 173 bp View
HM049180.1 nt Mariner mini-transposon delivery ve... 5615 bp Mariner mini-transposon delivery vector pMaGlow QL-ELE-00-003 173 bp View
HM049182.1 nt Mariner mini-transposon delivery ve... 7375 bp Mariner mini-transposon delivery vector pMaEvo QL-ELE-00-003 173 bp View
JN948643.1 emblreltgn Mus musculus targeted non-condition... 37964 bp Mus musculus QL-ELE-00-003 173 bp View
JN960234.1 emblreltgn Mus musculus targeted non-condition... 38658 bp Mus musculus QL-ELE-00-003 173 bp View
AB570107.1 nt Transformation vector pHA-neo3 DNA,... 5418 bp Transformation vector pHA-neo3 QL-ELE-00-003 173 bp View
AB570111.1 nt Transformation vector pFZZ-neo3 DNA... 5865 bp Transformation vector pFZZ-neo3 QL-ELE-00-003 173 bp View
HM365221.1 nt Mus musculus transgenic glucocortic... 4964 bp Mus musculus QL-ELE-00-003 173 bp View
JN947773.1 nt Mus musculus targeted non-condition... 38219 bp Mus musculus QL-ELE-00-003 173 bp View
JN947774.1 nt Mus musculus targeted non-condition... 40042 bp Mus musculus QL-ELE-00-003 173 bp View
JN960241.1 emblreltgn Mus musculus targeted non-condition... 39105 bp Mus musculus QL-ELE-00-003 173 bp View
JN947775.1 nt Mus musculus targeted non-condition... 37993 bp Mus musculus QL-ELE-00-003 173 bp View
JN947776.1 nt Mus musculus targeted non-condition... 38807 bp Mus musculus QL-ELE-00-003 173 bp View
HM588138.1 nt Targeting vector R26-Stop-HA3-ICA51... 9651 bp Targeting vector R26-Stop-HA3-ICA512-CCF QL-ELE-00-003 173 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-003 173 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.