Amplicon details

Amplicon:

173 bp
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JN960220.1 emblreltgn Mus musculus targeted non-condition... 37986 bp Mus musculus QL-ELE-00-003 173 bp View
GU734658.1 nt Plant transformation vector pSITEII... 5964 bp Plant transformation vector pSITEII-7C1 QL-ELE-00-003 173 bp View
GU734659.1 nt Plant transformation vector pSITEII... 5950 bp Plant transformation vector pSITEII-8C1 QL-ELE-00-003 173 bp View
JN948641.1 emblreltgn Mus musculus targeted KO-first, con... 37854 bp Mus musculus QL-ELE-00-003 173 bp View
GU937109.1 nt PiggyBac insertional mutagenesis ve... 15199 bp PiggyBac insertional mutagenesis vector Slingshot-PB QL-ELE-00-003 173 bp View
JN960227.1 emblreltgn Mus musculus targeted non-condition... 38046 bp Mus musculus QL-ELE-00-003 173 bp View
HM036220.1 nt Binary vector pKM24KH, complete seq... 12945 bp Binary vector pKM24KH QL-ELE-00-003 173 bp View
HM002749.1 nt Mycobacterial tetracycline-inducibl... 8798 bp Mycobacterial tetracycline-inducible vector pMEND-Lx QL-ELE-00-003 173 bp View
HM219007.1 nt Acinetobacter baumannii expression ... 5761 bp Acinetobacter baumannii expression vector pOT-RA QL-ELE-00-003 173 bp View
JN947762.1 nt Mus musculus targeted non-condition... 38071 bp Mus musculus QL-ELE-00-003 173 bp View
KC763189.1 emblreltgn Mus musculus transgenic clone RRT22... 8983 bp Mus musculus QL-ELE-00-003 173 bp View
JN947763.1 nt Mus musculus targeted non-condition... 41723 bp Mus musculus QL-ELE-00-003 173 bp View
JN948642.1 emblreltgn Mus musculus targeted non-condition... 39135 bp Mus musculus QL-ELE-00-003 173 bp View
JN947764.1 nt Mus musculus targeted non-condition... 38005 bp Mus musculus QL-ELE-00-003 173 bp View
JN947765.1 nt Mus musculus targeted non-condition... 37985 bp Mus musculus QL-ELE-00-003 173 bp View
JN947766.1 nt Mus musculus targeted non-condition... 37866 bp Mus musculus QL-ELE-00-003 173 bp View
JN947767.1 nt Mus musculus targeted non-condition... 38385 bp Mus musculus QL-ELE-00-003 173 bp View
JN947768.1 nt Mus musculus targeted non-condition... 38129 bp Mus musculus QL-ELE-00-003 173 bp View
JN947769.1 nt Mus musculus targeted non-condition... 38109 bp Mus musculus QL-ELE-00-003 173 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-003 173 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.