Amplicon details

Amplicon:

173 bp
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JN947749.1 nt Mus musculus targeted non-condition... 39021 bp Mus musculus QL-ELE-00-003 173 bp View
JN947750.1 nt Mus musculus targeted non-condition... 37951 bp Mus musculus QL-ELE-00-003 173 bp View
JN947751.1 nt Mus musculus targeted non-condition... 38198 bp Mus musculus QL-ELE-00-003 173 bp View
JN947752.1 nt Mus musculus targeted non-condition... 37906 bp Mus musculus QL-ELE-00-003 173 bp View
JN947753.1 nt Mus musculus targeted non-condition... 37853 bp Mus musculus QL-ELE-00-003 173 bp View
JN948612.1 emblreltgn Mus musculus targeted non-condition... 39163 bp Mus musculus QL-ELE-00-003 173 bp View
JN947754.1 nt Mus musculus targeted non-condition... 39482 bp Mus musculus QL-ELE-00-003 173 bp View
JN947755.1 nt Mus musculus targeted non-condition... 38883 bp Mus musculus QL-ELE-00-003 173 bp View
JN947756.1 nt Mus musculus targeted non-condition... 40225 bp Mus musculus QL-ELE-00-003 173 bp View
JN948613.1 emblreltgn Mus musculus targeted KO-first, con... 37943 bp Mus musculus QL-ELE-00-003 173 bp View
JN947757.1 nt Mus musculus targeted non-condition... 39058 bp Mus musculus QL-ELE-00-003 173 bp View
JN947758.1 nt Mus musculus targeted non-condition... 39744 bp Mus musculus QL-ELE-00-003 173 bp View
JN947759.1 nt Mus musculus targeted non-condition... 37993 bp Mus musculus QL-ELE-00-003 173 bp View
JN947760.1 nt Mus musculus targeted non-condition... 40811 bp Mus musculus QL-ELE-00-003 173 bp View
JN947761.1 nt Mus musculus targeted non-condition... 37878 bp Mus musculus QL-ELE-00-003 173 bp View
GQ872121.1 nt EIAV-based lentiviral vector, compl... 7941 bp EIAV-based lentiviral vector QL-ELE-00-003 173 bp View
GQ889495.1 nt Recombineering donor plasmid pDOC-H... 7250 bp Recombineering donor plasmid pDOC-H QL-ELE-00-003 173 bp View
GQ889496.1 nt Recombineering donor plasmid pDOC-F... 7444 bp Recombineering donor plasmid pDOC-F QL-ELE-00-003 173 bp View
GQ889497.1 nt Recombineering donor plasmid pDOC-P... 7949 bp Recombineering donor plasmid pDOC-P QL-ELE-00-003 173 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-003 173 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.