Amplicon details

Amplicon:

173 bp
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
GQ497232.1 nt Binary vector pEAQspecialK, complet... 8643 bp Binary vector pEAQspecialK QL-ELE-00-003 173 bp View
JN948607.1 emblreltgn Mus musculus targeted non-condition... 38004 bp Mus musculus QL-ELE-00-003 173 bp View
GQ497233.1 nt Binary vector pEAQspecialKm, comple... 8643 bp Binary vector pEAQspecialKm QL-ELE-00-003 173 bp View
GQ497234.1 nt Binary vector pEAQ-HT, complete seq... 10003 bp Binary vector pEAQ-HT QL-ELE-00-003 173 bp View
JN948608.1 emblreltgn Mus musculus targeted non-condition... 40212 bp Mus musculus QL-ELE-00-003 173 bp View
GQ497235.1 nt Binary vector pEAQ-HT-DEST1, comple... 11654 bp Binary vector pEAQ-HT-DEST1 QL-ELE-00-003 173 bp View
JN948609.1 emblreltgn Mus musculus targeted non-condition... 38275 bp Mus musculus QL-ELE-00-003 173 bp View
GQ497237.1 nt Binary vector pEAQ-HT-DEST3, comple... 11684 bp Binary vector pEAQ-HT-DEST3 QL-ELE-00-003 173 bp View
JN948610.1 emblreltgn Mus musculus targeted non-condition... 39359 bp Mus musculus QL-ELE-00-003 173 bp View
GQ380658.1 nt AAVS1 targeting vector pA1.GFP.A2, ... 12653 bp AAVS1 targeting vector pA1.GFP.A2 QL-ELE-00-003 173 bp View
JN947748.1 nt Mus musculus targeted non-condition... 40005 bp Mus musculus QL-ELE-00-003 173 bp View
GQ463722.1 nt Physcomitrella transformation vecto... 6787 bp Physcomitrella transformation vector pBS108-35SNPT-b QL-ELE-00-003 173 bp View
JN948611.1 emblreltgn Mus musculus targeted non-condition... 39301 bp Mus musculus QL-ELE-00-003 173 bp View
GQ463143.1 nt Vibrio cholerae Mex1 integrating co... 83194 bp Vibrio cholerae Mex1 QL-ELE-00-003 173 bp View
AB524006.1 nt Gateway binary vector R4L1pGWB432 D... 13359 bp Gateway binary vector R4L1pGWB432 QL-ELE-00-003 173 bp View
AB524007.1 nt Gateway binary vector R4L1pGWB433 D... 12642 bp Gateway binary vector R4L1pGWB433 QL-ELE-00-003 173 bp View
AB524008.1 nt Gateway binary vector R4L1pGWB435 D... 12483 bp Gateway binary vector R4L1pGWB435 QL-ELE-00-003 173 bp View
AB524010.1 nt Gateway binary vector R4L1pGWB443 D... 11550 bp Gateway binary vector R4L1pGWB443 QL-ELE-00-003 173 bp View
AB524011.1 nt Gateway binary vector R4L1pGWB450 D... 11547 bp Gateway binary vector R4L1pGWB450 QL-ELE-00-003 173 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-003 173 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.