Amplicon details

Amplicon:

173 bp
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
DQ813654.3 nt Cloning vector pINT, complete sequence. 8008 bp Cloning vector pINT QL-ELE-00-003 173 bp View
CP116177.1 nt Escherichia coli strain DETEC-E601 ... 93520 bp Escherichia coli QL-ELE-00-003 173 bp View
JN947744.1 nt Mus musculus targeted non-condition... 39198 bp Mus musculus QL-ELE-00-003 173 bp View
JN947745.1 nt Mus musculus targeted non-condition... 38719 bp Mus musculus QL-ELE-00-003 173 bp View
JN947746.1 nt Mus musculus targeted non-condition... 39425 bp Mus musculus QL-ELE-00-003 173 bp View
GQ229579.1 nt Cloning vector pBIND-ER (alpha), co... 7605 bp Cloning vector pBIND-ER (alpha) QL-ELE-00-003 173 bp View
GQ229580.1 nt Cloning vector pBIND-GR, complete s... 7548 bp Cloning vector pBIND-GR QL-ELE-00-003 173 bp View
AB512772.1 nt Gene silencing vector pSilent-Dual1... 5567 bp Gene silencing vector pSilent-Dual1 QL-ELE-00-003 173 bp View
GQ258348.1 nt Cloning vector pRama-31, complete s... 4828 bp Cloning vector pRama-31 QL-ELE-00-003 173 bp View
GQ258349.1 nt Cloning vector pRama-34, complete s... 8361 bp Cloning vector pRama-34 QL-ELE-00-003 173 bp View
GQ258350.1 nt Cloning vector pRama-35, complete s... 5312 bp Cloning vector pRama-35 QL-ELE-00-003 173 bp View
AB508948.1 nt Mammalian expression vector pC[Delt... 7703 bp Mammalian expression vector pC[Delta]E-chimUAAgaCAA21FLucH QL-ELE-00-003 173 bp View
JN948606.1 emblreltgn Mus musculus targeted non-condition... 38340 bp Mus musculus QL-ELE-00-003 173 bp View
GQ340758.1 nt Cloning vector pCMV-HIF-1a-FLAG, co... 7858 bp Cloning vector pCMV-HIF-1a-FLAG QL-ELE-00-003 173 bp View
FJ524378.1 nt Expression vector pcDNA/HA-FLAG, co... 5560 bp Expression vector pcDNA/HA-FLAG QL-ELE-00-003 173 bp View
GQ268961.1 nt Fusion vector pDsred-express::plac:... 5940 bp Fusion vector pDsred-express::plac::prrn::pd1egfp QL-ELE-00-003 173 bp View
JN947747.1 nt Mus musculus targeted non-condition... 37983 bp Mus musculus QL-ELE-00-003 173 bp View
FJ015154.1 nt Synthetic construct galactose perme... 2853 bp synthetic construct QL-ELE-00-003 173 bp View
DI095629.1 emblrelpat METHOD FOR THE GENETIC MODIFICATION... 17593 bp unidentified QL-ELE-00-003 173 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-003 173 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.