Amplicon details

Amplicon:

173 bp
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
FJ155667.1 nt Allelic replacement vector pJC84, c... 3775 bp Allelic replacement vector pJC84 QL-ELE-00-003 173 bp View
JN947734.1 nt Mus musculus targeted non-condition... 39557 bp Mus musculus QL-ELE-00-003 173 bp View
JN948591.1 emblreltgn Mus musculus targeted non-condition... 39511 bp Mus musculus QL-ELE-00-003 173 bp View
JN948592.1 emblreltgn Mus musculus targeted non-condition... 37985 bp Mus musculus QL-ELE-00-003 173 bp View
FJ267588.1 nt Suicide vector pMO90, complete sequ... 4396 bp Suicide vector pMO90 QL-ELE-00-003 173 bp View
FJ267589.1 nt Insertional disruption vector pMO12... 4788 bp Insertional disruption vector pMO126 QL-ELE-00-003 173 bp View
FJ267590.1 nt Replicative vector pMO79, complete ... 8021 bp Replicative vector pMO79 QL-ELE-00-003 173 bp View
JN947735.1 nt Mus musculus targeted non-condition... 39285 bp Mus musculus QL-ELE-00-003 173 bp View
FJ268733.1 nt Cloning vector pRGK374, complete se... 11746 bp Cloning vector pRGK374 QL-ELE-00-003 173 bp View
JN948593.1 emblreltgn Mus musculus targeted non-condition... 37922 bp Mus musculus QL-ELE-00-003 173 bp View
DI095621.1 emblrelpat METHOD FOR THE GENETIC MODIFICATION... 11611 bp unidentified QL-ELE-00-003 173 bp View
FJ380063.1 nt Suicide vector pMQ200, complete seq... 6281 bp Suicide vector pMQ200 QL-ELE-00-003 173 bp View
JN948594.1 emblreltgn Mus musculus targeted non-condition... 39667 bp Mus musculus QL-ELE-00-003 173 bp View
JN948595.1 emblreltgn Mus musculus targeted non-condition... 38015 bp Mus musculus QL-ELE-00-003 173 bp View
JN959912.1 emblreltgn Mus musculus targeted KO-first, con... 38738 bp Mus musculus QL-ELE-00-003 173 bp View
FJ376737.1 nt Cloning vector pmirGLO, complete se... 7350 bp Cloning vector pmirGLO QL-ELE-00-003 173 bp View
FJ437239.1 nt Cloning vector pK18mobsacB, complet... 5719 bp Cloning vector pK18mobsacB QL-ELE-00-003 173 bp View
FJ467933.1 nt Carica papaya transgenic cultivar R... 15595 bp Carica papaya QL-ELE-00-003 173 bp View
JN948596.1 emblreltgn Mus musculus targeted non-condition... 39993 bp Mus musculus QL-ELE-00-003 173 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-003 173 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.