Amplicon details

Amplicon:

173 bp
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JN947726.1 nt Mus musculus targeted non-condition... 37924 bp Mus musculus QL-ELE-00-003 173 bp View
JN947727.1 nt Mus musculus targeted non-condition... 40488 bp Mus musculus QL-ELE-00-003 173 bp View
HF949693.1 nt Boechera divaricarpa GSS, clone B59... 1127 bp Boechera divaricarpa QL-ELE-00-003 173 bp View
JN947728.1 nt Mus musculus targeted non-condition... 38001 bp Mus musculus QL-ELE-00-003 173 bp View
HF951022.1 nt Boechera divaricarpa GSS, clone B62... 1113 bp Boechera divaricarpa QL-ELE-00-003 173 bp View
EU862243.1 nt Burkholderia suicide vector pMo130,... 6127 bp Burkholderia suicide vector pMo130 QL-ELE-00-003 173 bp View
EU862244.1 nt Burkholderia replicative vector pMo... 7108 bp Burkholderia replicative vector pMo168 QL-ELE-00-003 173 bp View
JN947729.1 nt Mus musculus targeted non-condition... 37815 bp Mus musculus QL-ELE-00-003 173 bp View
JN947730.1 nt Mus musculus targeted KO-first, con... 37948 bp Mus musculus QL-ELE-00-003 173 bp View
JN947731.1 nt Mus musculus targeted non-condition... 38386 bp Mus musculus QL-ELE-00-003 173 bp View
JN947732.1 nt Mus musculus targeted non-condition... 40490 bp Mus musculus QL-ELE-00-003 173 bp View
JN947733.1 nt Mus musculus targeted non-condition... 37989 bp Mus musculus QL-ELE-00-003 173 bp View
JN948590.1 emblreltgn Mus musculus targeted non-condition... 38032 bp Mus musculus QL-ELE-00-003 173 bp View
EU908848.1 nt Expression vector pDM309, complete ... 8596 bp Expression vector pDM309 QL-ELE-00-003 173 bp View
EU933992.1 nt Agrobacterium binary gap repair vec... 7890 bp Agrobacterium binary gap repair vector pGAP-Km QL-ELE-00-003 173 bp View
EU912539.1 nt Expression vector pDM304, complete ... 6839 bp Expression vector pDM304 QL-ELE-00-003 173 bp View
EU912540.1 nt Expression vector pDM320, complete ... 6878 bp Expression vector pDM320 QL-ELE-00-003 173 bp View
AB434472.1 nt Synthetic construct aphA, pyrE, gfp... 4263 bp synthetic construct QL-ELE-00-003 173 bp View
AB434474.1 nt Synthetic construct gfpuv5, aphA ge... 3068 bp synthetic construct QL-ELE-00-003 173 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-003 173 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.