Amplicon details

Amplicon:

173 bp
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
EU530627.1 nt Cloning vector pECFPpA-ACN, complet... 7904 bp Cloning vector pECFPpA-ACN QL-ELE-00-003 173 bp View
EU530628.1 nt Cloning vector pAP-ACN, complete se... 8196 bp Cloning vector pAP-ACN QL-ELE-00-003 173 bp View
EU530629.1 nt Cloning vector pnlslacZ-ACN, comple... 9675 bp Cloning vector pnlslacZ-ACN QL-ELE-00-003 173 bp View
EU530630.1 nt Cloning vector pEYFPpA-ACN, complet... 7904 bp Cloning vector pEYFPpA-ACN QL-ELE-00-003 173 bp View
EU676801.1 nt Gene trapping vector VICTR76 inferr... 6500 bp Gene trapping vector VICTR76 QL-ELE-00-003 173 bp View
EU676802.1 nt Gene trapping vector VICTR75 inferr... 6638 bp Gene trapping vector VICTR75 QL-ELE-00-003 173 bp View
EU676803.1 nt Gene trapping vector VICTR74 inferr... 4218 bp Gene trapping vector VICTR74 QL-ELE-00-003 173 bp View
EU676804.1 nt Gene trapping vector VICTR48 inferr... 5174 bp Gene trapping vector VICTR48 QL-ELE-00-003 173 bp View
FM162567.1 nt Trypanosoma brucei Lister 427 surfa... 51758 bp Trypanosoma brucei brucei QL-ELE-00-003 173 bp View
JN947723.1 nt Mus musculus targeted non-condition... 39527 bp Mus musculus QL-ELE-00-003 173 bp View
JN948586.1 emblreltgn Mus musculus targeted non-condition... 39098 bp Mus musculus QL-ELE-00-003 173 bp View
JN948587.1 emblreltgn Mus musculus targeted non-condition... 38422 bp Mus musculus QL-ELE-00-003 173 bp View
JN948588.1 emblreltgn Mus musculus targeted non-condition... 38048 bp Mus musculus QL-ELE-00-003 173 bp View
JN948589.1 emblreltgn Mus musculus targeted non-condition... 39191 bp Mus musculus QL-ELE-00-003 173 bp View
AB293445.1 nt Saccharomyces cerevisiae gene for a... 43682 bp Saccharomyces cerevisiae QL-ELE-00-003 173 bp View
AB293446.1 nt Saccharomyces cerevisiae gene for a... 45016 bp Saccharomyces cerevisiae QL-ELE-00-003 173 bp View
KP259613.2 nt Binary RNAi Gateway destination vec... 12660 bp Binary RNAi Gateway destination vector pAGSM552 QL-ELE-00-003 173 bp View
JN947724.1 nt Mus musculus targeted non-condition... 37756 bp Mus musculus QL-ELE-00-003 173 bp View
JN947725.1 nt Mus musculus targeted non-condition... 37847 bp Mus musculus QL-ELE-00-003 173 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-003 173 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.