Amplicon details

Amplicon:

173 bp
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
EU327497.1 nt Binary vector pBLNSC, complete sequ... 17613 bp Binary vector pBLNSC QL-ELE-00-003 173 bp View
JN959750.1 emblreltgn Mus musculus targeted KO-first, con... 37955 bp Mus musculus QL-ELE-00-003 173 bp View
JN959757.1 emblreltgn Mus musculus targeted non-condition... 39111 bp Mus musculus QL-ELE-00-003 173 bp View
EU327976.1 nt Binary vector pBCRE, complete sequence. 14147 bp Binary vector pBCRE QL-ELE-00-003 173 bp View
JN948582.1 emblreltgn Mus musculus targeted non-condition... 38627 bp Mus musculus QL-ELE-00-003 173 bp View
JN948583.1 emblreltgn Mus musculus targeted non-condition... 38336 bp Mus musculus QL-ELE-00-003 173 bp View
EU315007.1 nt Transformation vector pC23C, comple... 11274 bp Transformation vector pC23C QL-ELE-00-003 173 bp View
CP113199.1 nt Klebsiella pneumoniae strain SCLC3-... 36155 bp Klebsiella pneumoniae QL-ELE-00-003 173 bp View
JN959847.1 emblreltgn Mus musculus targeted KO-first, con... 38044 bp Mus musculus QL-ELE-00-003 173 bp View
EU328349.1 nt Shuttle vector pZJY41, complete seq... 6740 bp Shuttle vector pZJY41 QL-ELE-00-003 173 bp View
EU328350.1 nt Shuttle vector pZJY156, complete se... 5933 bp Shuttle vector pZJY156 QL-ELE-00-003 173 bp View
EU421131.1 nt Episomal vector pMARS-mODC-AZ, comp... 5742 bp Episomal vector pMARS-mODC-AZ QL-ELE-00-003 173 bp View
EU421132.1 nt Episomal vector pMARS-mODC-ZA, comp... 5742 bp Episomal vector pMARS-mODC-ZA QL-ELE-00-003 173 bp View
EU491017.1 nt Suicide vector pEX18Km-pheS, comple... 5161 bp Suicide vector pEX18Km-pheS QL-ELE-00-003 173 bp View
AB427140.1 nt Exchangeable gene trap vector pU-21... 9333 bp Exchangeable gene trap vector pU-21W QL-ELE-00-003 173 bp View
JN948584.1 emblreltgn Mus musculus targeted non-condition... 40772 bp Mus musculus QL-ELE-00-003 173 bp View
JN948585.1 emblreltgn Mus musculus targeted non-condition... 38960 bp Mus musculus QL-ELE-00-003 173 bp View
EU546818.1 nt Cloning vector pMQ118, complete seq... 5980 bp Cloning vector pMQ118 QL-ELE-00-003 173 bp View
EU546823.1 nt Cloning vector pMQ150, complete seq... 8116 bp Cloning vector pMQ150 QL-ELE-00-003 173 bp View
KP171153.1 nt Binary Vector pYBA-1322, complete s... 5914 bp Binary Vector pYBA-1322 QL-ELE-00-003 173 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.