Amplicon details

Amplicon:

173 bp
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JN959743.1 emblreltgn Mus musculus targeted non-condition... 37917 bp Mus musculus QL-ELE-00-003 173 bp View
JN948578.1 emblreltgn Mus musculus targeted non-condition... 38222 bp Mus musculus QL-ELE-00-003 173 bp View
AB366441.1 nt Salmonella enterica subsp. enterica... 61571 bp Salmonella enterica subsp. enterica serovar Dublin QL-ELE-00-003 173 bp View
EU224422.1 nt Plastid transformation vector pPRV1... 7418 bp Plastid transformation vector pPRV145C QL-ELE-00-003 173 bp View
EU224423.1 nt Plastid transformation vector pPRV1... 7406 bp Plastid transformation vector pPRV145D QL-ELE-00-003 173 bp View
EU232661.1 nt Cloning vector pVMG-TnpR, complete ... 7264 bp Cloning vector pVMG-TnpR QL-ELE-00-003 173 bp View
EU232662.1 nt Cloning vector pVMGCRT85, complete ... 11368 bp Cloning vector pVMGCRT85 QL-ELE-00-003 173 bp View
JN948579.1 emblreltgn Mus musculus targeted non-condition... 39594 bp Mus musculus QL-ELE-00-003 173 bp View
EU257519.1 nt Cloning vector pSAM, complete sequence. 6348 bp Cloning vector pSAM QL-ELE-00-003 173 bp View
EU257520.1 nt Cloning vector pTOR, complete sequence. 6531 bp Cloning vector pTOR QL-ELE-00-003 173 bp View
EU257521.1 nt Cloning vector pNICO, complete sequ... 7269 bp Cloning vector pNICO QL-ELE-00-003 173 bp View
EU257522.1 nt Cloning vector pNC-GFP, complete se... 6966 bp Cloning vector pNC-GFP QL-ELE-00-003 173 bp View
JN947722.1 nt Mus musculus targeted non-condition... 38086 bp Mus musculus QL-ELE-00-003 173 bp View
AB267085.2 nt Shuttle vector pNV18 DNA, complete ... 4411 bp Shuttle vector pNV18 QL-ELE-00-003 173 bp View
AB267086.2 nt Shuttle vector pNV19 DNA, complete ... 4411 bp Shuttle vector pNV19 QL-ELE-00-003 173 bp View
JN948580.1 emblreltgn Mus musculus targeted non-condition... 38233 bp Mus musculus QL-ELE-00-003 173 bp View
EU327495.1 nt Transformation vector pC23LB, compl... 10640 bp Transformation vector pC23LB QL-ELE-00-003 173 bp View
EU327496.1 nt Transformation vector pC23LG, compl... 11900 bp Transformation vector pC23LG QL-ELE-00-003 173 bp View
JN948581.1 emblreltgn Mus musculus targeted non-condition... 38610 bp Mus musculus QL-ELE-00-003 173 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-003 173 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.