Amplicon details

Amplicon:

173 bp
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
EF437951.1 nt Expression vector pcDNA3-AQP4d, com... 6349 bp Expression vector pcDNA3-AQP4d QL-ELE-00-003 173 bp View
EF437952.1 nt Expression vector pXoom-AQP4d, comp... 5829 bp Expression vector pXoom-AQP4d QL-ELE-00-003 173 bp View
JN948568.1 emblreltgn Mus musculus targeted KO-first, con... 38651 bp Mus musculus QL-ELE-00-003 173 bp View
EF437955.1 nt Expression vector pXoom-AQP4e, comp... 6182 bp Expression vector pXoom-AQP4e QL-ELE-00-003 173 bp View
EF437956.1 nt Expression vector pcDNA3-AQP4f, com... 6510 bp Expression vector pcDNA3-AQP4f QL-ELE-00-003 173 bp View
EU024546.1 nt Cloning vector pCPP5702, complete s... 8791 bp Cloning vector pCPP5702 QL-ELE-00-003 173 bp View
EU024548.1 nt Cloning vector pCPP5250, complete s... 5155 bp Cloning vector pCPP5250 QL-ELE-00-003 173 bp View
JN948569.1 emblreltgn Mus musculus targeted KO-first, con... 38088 bp Mus musculus QL-ELE-00-003 173 bp View
JN959646.1 emblreltgn Mus musculus targeted non-condition... 39393 bp Mus musculus QL-ELE-00-003 173 bp View
EU047752.1 nt Cloning vector pDC8, complete sequence. 11987 bp Cloning vector pDC8 QL-ELE-00-003 173 bp View
JN959653.1 emblreltgn Mus musculus targeted non-condition... 38050 bp Mus musculus QL-ELE-00-003 173 bp View
JN948570.1 emblreltgn Mus musculus targeted KO-first, con... 39343 bp Mus musculus QL-ELE-00-003 173 bp View
JN947719.1 nt Mus musculus targeted non-condition... 39713 bp Mus musculus QL-ELE-00-003 173 bp View
AB362337.1 nt Exchangeable gene trap vector pU-22... 6582 bp Exchangeable gene trap vector pU-22 QL-ELE-00-003 173 bp View
JN947720.1 nt Mus musculus targeted non-condition... 38001 bp Mus musculus QL-ELE-00-003 173 bp View
JN947721.1 nt Mus musculus targeted non-condition... 36503 bp Mus musculus QL-ELE-00-003 173 bp View
EU146228.1 nt Transposon delivery vector pAW068, ... 9406 bp Transposon delivery vector pAW068 QL-ELE-00-003 173 bp View
AB364163.1 nt Gateway binary vector R4pGWB401 DNA... 10835 bp Gateway binary vector R4pGWB401 QL-ELE-00-003 173 bp View
JN948571.1 emblreltgn Mus musculus targeted KO-first, con... 38087 bp Mus musculus QL-ELE-00-003 173 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-003 173 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.