Amplicon details

Amplicon:

173 bp
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
EF515874.1 nt Gateway binary vector pKPFWG2, comp... 11539 bp Gateway binary vector pKPFWG2 QL-ELE-00-003 173 bp View
EF515875.1 nt Gateway binary vector pKPWGF2, comp... 11535 bp Gateway binary vector pKPWGF2 QL-ELE-00-003 173 bp View
JN947712.1 nt Mus musculus targeted non-condition... 40103 bp Mus musculus QL-ELE-00-003 173 bp View
JN947713.1 nt Mus musculus targeted KO-first, con... 38572 bp Mus musculus QL-ELE-00-003 173 bp View
JN948564.1 emblreltgn Mus musculus targeted non-condition... 38107 bp Mus musculus QL-ELE-00-003 173 bp View
JN947714.1 nt Mus musculus targeted non-condition... 38579 bp Mus musculus QL-ELE-00-003 173 bp View
JN954566.1 nt Mus musculus targeted deletion, lac... 37222 bp Mus musculus QL-ELE-00-003 173 bp View
JN959632.1 emblreltgn Mus musculus targeted non-condition... 37987 bp Mus musculus QL-ELE-00-003 173 bp View
EF591492.1 nt Gene-trap helper vector pPrm1-PBase... 5961 bp Gene-trap helper vector pPrm1-PBase QL-ELE-00-003 173 bp View
EF536932.1 nt Synthetic construct Kunjin virus re... 11046 bp synthetic construct QL-ELE-00-003 173 bp View
JN948565.1 emblreltgn Mus musculus targeted KO-first, con... 38154 bp Mus musculus QL-ELE-00-003 173 bp View
JN948566.1 emblreltgn Mus musculus targeted KO-first, con... 38297 bp Mus musculus QL-ELE-00-003 173 bp View
JN948567.1 emblreltgn Mus musculus targeted non-condition... 38467 bp Mus musculus QL-ELE-00-003 173 bp View
JN959639.1 emblreltgn Mus musculus targeted non-condition... 40249 bp Mus musculus QL-ELE-00-003 173 bp View
JN947715.1 nt Mus musculus targeted non-condition... 38056 bp Mus musculus QL-ELE-00-003 173 bp View
CP000744.1 nt Pseudomonas aeruginosa PA7, complet... 6588339 bp Pseudomonas aeruginosa PA7 QL-ELE-00-003 173 bp View
JN947716.1 nt Mus musculus targeted non-condition... 39586 bp Mus musculus QL-ELE-00-003 173 bp View
JN947717.1 nt Mus musculus targeted non-condition... 39684 bp Mus musculus QL-ELE-00-003 173 bp View
JN947718.1 nt Mus musculus targeted non-condition... 39941 bp Mus musculus QL-ELE-00-003 173 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-003 173 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.