Amplicon details

Amplicon:

173 bp
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
AB281497.1 nt Expression vector pCXGFP-1 DNA, com... 6787 bp Expression vector pCXGFP-1 QL-ELE-00-003 173 bp View
EF030424.1 nt ORF selection vector pSOS plasmid p... 4208 bp ORF selection vector pSOS QL-ELE-00-003 173 bp View
EF090404.1 nt Cloning/transgenesis vector pC5-Kan... 2613 bp Cloning/transgenesis vector pC5-Kan QL-ELE-00-003 173 bp View
EF090405.1 nt Cloning/transgenesis vector pC5-Kan... 2613 bp Cloning/transgenesis vector pC5-Kan_delta_SphI QL-ELE-00-003 173 bp View
JN947710.1 nt Mus musculus targeted non-condition... 40417 bp Mus musculus QL-ELE-00-003 173 bp View
OL312705.1 nt Cloning vector pAaePUb::Cas9-2A-Neo... 8802 bp Cloning vector pAaePUb::Cas9-2A-Neo QL-ELE-00-003 173 bp View
CP055007.1 nt Klebsiella pneumoniae strain STIN_7... 66378 bp Klebsiella pneumoniae QL-ELE-00-003 173 bp View
CP058727.1 nt Escherichia coli strain S171-1 plas... 91934 bp Escherichia coli QL-ELE-00-003 173 bp View
LC708162.1 nt Synthetic construct plasmid mitoTAL... 22426 bp synthetic construct QL-ELE-00-003 173 bp View
MW651970.1 nt Expression vector Dual-Inducible-Ca... 15365 bp Expression vector Dual-Inducible-Cas9-hALB QL-ELE-00-003 173 bp View
CP100737.1 nt Salmonella enterica subsp. enterica... 258626 bp Salmonella enterica subsp. enterica serovar Agona QL-ELE-00-003 173 bp View
OL982754.1 nt Cloning vector BUT-delT7-Kan(STOP)-... 8116 bp Cloning vector BUT-delT7-Kan(STOP)-TetA(STOP) QL-ELE-00-003 173 bp View
MW690026.1 nt Synthetic construct clone pMiniSym-... 11369 bp synthetic construct QL-ELE-00-003 173 bp View
OM294658.1 nt Cloning vector pCRISPRi/dCas9/NLS23... 10283 bp unidentified QL-ELE-00-003 173 bp View
ON681665.1 nt Vector pAB923, complete sequence. 7650 bp Vector pAB923 QL-ELE-00-003 173 bp View
ON681676.1 nt Vector pTS863, complete sequence. 7232 bp Vector pTS863 QL-ELE-00-003 173 bp View
ON681684.1 nt Vector pTS871, complete sequence. 7631 bp Vector pTS871 QL-ELE-00-003 173 bp View
ON681695.1 nt Vector pTS991, complete sequence. 8301 bp Vector pTS991 QL-ELE-00-003 173 bp View
CP104199.1 nt Klebsiella pneumoniae strain CHN230... 49316 bp Klebsiella pneumoniae QL-ELE-00-003 173 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-003 173 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.