Amplicon details

Amplicon:

173 bp
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
DQ228131.1 nt Moss transformation vector pMBL6, c... 4295 bp Moss transformation vector pMBL6 QL-ELE-00-003 173 bp View
AY589053.1 nt Mus musculus transgenic truncated l... 5535 bp Mus musculus QL-ELE-00-003 173 bp View
AY738638.1 nt Cloning vector pJK95, complete sequ... 4791 bp Cloning vector pJK95 QL-ELE-00-003 173 bp View
AY841887.1 nt Trafficking reporter vector pIN-G p... 5042 bp Trafficking reporter vector pIN-G QL-ELE-00-003 173 bp View
JN947697.1 nt Mus musculus targeted non-condition... 37898 bp Mus musculus QL-ELE-00-003 173 bp View
U23751.1 nt Cloning vector pBBR1MCS-2 plasmid p... 5144 bp Cloning vector pBBR1MCS-2 QL-ELE-00-003 173 bp View
JN948560.1 emblreltgn Mus musculus targeted non-condition... 38026 bp Mus musculus QL-ELE-00-003 173 bp View
DQ408591.1 nt Transposon mutagenesis vector pG18-... 7657 bp Transposon mutagenesis vector pG18-STM QL-ELE-00-003 173 bp View
DQ377843.1 nt Mus musculus transgenic G610C Neo+ ... 2766 bp Mus musculus QL-ELE-00-003 173 bp View
AB255647.1 nt Exchangeable gene trap vector pU-21... 9399 bp Exchangeable gene trap vector pU-21B QL-ELE-00-003 173 bp View
AB255648.1 nt Exchangeable gene trap vector pU-21... 9357 bp Exchangeable gene trap vector pU-21T QL-ELE-00-003 173 bp View
JN947698.1 nt Mus musculus targeted non-condition... 37898 bp Mus musculus QL-ELE-00-003 173 bp View
JN948561.1 emblreltgn Mus musculus targeted non-condition... 38271 bp Mus musculus QL-ELE-00-003 173 bp View
JN948562.1 emblreltgn Mus musculus targeted non-condition... 38061 bp Mus musculus QL-ELE-00-003 173 bp View
DQ869004.1 nt Binary vector pMOA33, partial sequence. 2010 bp Binary vector pMOA33 QL-ELE-00-003 173 bp View
JN947699.1 nt Mus musculus targeted KO-first, con... 38065 bp Mus musculus QL-ELE-00-003 173 bp View
JN947700.1 nt Mus musculus targeted non-condition... 38064 bp Mus musculus QL-ELE-00-003 173 bp View
JN947701.1 nt Mus musculus targeted non-condition... 38072 bp Mus musculus QL-ELE-00-003 173 bp View
JN947702.1 nt Mus musculus targeted non-condition... 40506 bp Mus musculus QL-ELE-00-003 173 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-003 173 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.