Amplicon details

Amplicon:

173 bp
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
AY037297.1 nt Synthetic construct erythromycin re... 7080 bp synthetic construct QL-ELE-00-003 173 bp View
AY260553.1 nt Retrotransposon vector ELM 5, compl... 10047 bp Retrotransposon vector ELM 5 QL-ELE-00-003 173 bp View
AY260554.1 nt Retrotransposon vector MEL/ELM, com... 9945 bp Retrotransposon vector MEL/ELM QL-ELE-00-003 173 bp View
AB242435.1 nt Cloning vector pSINTK DNA, complete... 7208 bp Cloning vector pSINTK QL-ELE-00-003 173 bp View
AB242616.1 nt Exchangeable gene trap vector pU-Ha... 10032 bp Exchangeable gene trap vector pU-Hachi QL-ELE-00-003 173 bp View
JN947689.1 nt Mus musculus targeted non-condition... 37982 bp Mus musculus QL-ELE-00-003 173 bp View
JN947690.1 nt Mus musculus targeted non-condition... 37979 bp Mus musculus QL-ELE-00-003 173 bp View
AY115560.1 nt Transposon delivery vector pSC189, ... 6982 bp Transposon delivery vector pSC189 QL-ELE-00-003 173 bp View
U09365.1 nt Binary vector Bin19, complete sequence. 11777 bp Binary vector Bin19 QL-ELE-00-003 173 bp View
DQ236098.1 nt Himar1-delivery and mutagenesis vec... 10027 bp Himar1-delivery and mutagenesis vector pFNLTP16 H3 QL-ELE-00-003 173 bp View
U55762.1 nt Cloning vector pEGFP-N1, complete s... 4733 bp Cloning vector pEGFP-N1 QL-ELE-00-003 173 bp View
U57607.1 nt Cloning vector pEGFP-C3 with enhanc... 4727 bp Cloning vector pEGFP-C3 QL-ELE-00-003 173 bp View
U57608.1 nt Cloning vector pEGFP-N2 with enhanc... 4737 bp Cloning vector pEGFP-N2 QL-ELE-00-003 173 bp View
U57609.1 nt Cloning vector pEGFP-N3 with enhanc... 4729 bp Cloning vector pEGFP-N3 QL-ELE-00-003 173 bp View
AY222815.1 nt Cloning vector pK19mob2, complete s... 3036 bp Cloning vector pK19mob2 QL-ELE-00-003 173 bp View
AY222822.1 nt Shuttle vector pEC-K19mob2, complet... 5695 bp Shuttle vector pEC-K19mob2 QL-ELE-00-003 173 bp View
AY219683.1 nt Shuttle expression vector pEC-XK99E... 7018 bp Shuttle expression vector pEC-XK99E QL-ELE-00-003 173 bp View
AY219686.1 nt Expression vector pXK99E, complete ... 4359 bp Expression vector pXK99E QL-ELE-00-003 173 bp View
AY219691.1 nt Shuttle vector pBHK18, complete seq... 3337 bp Shuttle vector pBHK18 QL-ELE-00-003 173 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-003 173 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.