Amplicon details

Amplicon:

173 bp
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
AY048713.1 nt CRIM plasmid pAH55, complete sequence. 6664 bp CRIM plasmid pAH55 QL-ELE-00-003 173 bp View
AY048716.1 nt CRIM plasmid pAH63, complete sequence. 3663 bp CRIM plasmid pAH63 QL-ELE-00-003 173 bp View
AY048719.1 nt CRIM plasmid pAH70, complete sequence. 3534 bp CRIM plasmid pAH70 QL-ELE-00-003 173 bp View
AY048722.1 nt CRIM plasmid pAH95, complete sequence. 3843 bp CRIM plasmid pAH95 QL-ELE-00-003 173 bp View
AY048723.1 nt CRIM plasmid pAH120, complete sequence. 2959 bp CRIM plasmid pAH120 QL-ELE-00-003 173 bp View
AY048733.1 nt CRIM plasmid pAH150, complete sequence. 3695 bp CRIM plasmid pAH150 QL-ELE-00-003 173 bp View
AY054372.1 nt CRIM plasmid pAH125, complete sequence. 5739 bp CRIM plasmid pAH125 QL-ELE-00-003 173 bp View
AF433043.1 nt Cloning vector pWS32, complete sequ... 6928 bp Cloning vector pWS32 QL-ELE-00-003 173 bp View
AF425298.1 nt Expression vector pGA2, complete se... 2947 bp Expression vector pGA2 QL-ELE-00-003 173 bp View
AF425299.1 nt Expression vector pGA3, complete se... 3893 bp Expression vector pGA3 QL-ELE-00-003 173 bp View
AF416990.1 nt Synthetic construct plasmid pcDNA3-... 6394 bp synthetic construct QL-ELE-00-003 173 bp View
AF455027.1 nt Retroviral vector VLMB, complete se... 9685 bp Retroviral vector VLMB QL-ELE-00-003 173 bp View
AY062236.1 nt Transformation vector pRLE6, comple... 5844 bp Transformation vector pRLE6 QL-ELE-00-003 173 bp View
L47836.1 nt Cloning vector pKIL198, complete se... 2770 bp Cloning vector pKIL198 QL-ELE-00-003 173 bp View
L47837.1 nt Cloning vector pKIL199, complete se... 2770 bp Cloning vector pKIL199 QL-ELE-00-003 173 bp View
AF458478.1 nt Binary vector pLH9000, complete seq... 9154 bp Binary vector pLH9000 QL-ELE-00-003 173 bp View
AF458479.1 nt Binary vector pLH9500, complete seq... 9146 bp Binary vector pLH9500 QL-ELE-00-003 173 bp View
AF504908.1 nt Cloning vector pBBRT, complete sequ... 5973 bp Cloning vector pBBRT QL-ELE-00-003 173 bp View
JN947683.1 nt Mus musculus targeted non-condition... 38898 bp Mus musculus QL-ELE-00-003 173 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-003 173 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.