Amplicon details

Amplicon:

173 bp
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JN947681.1 nt Mus musculus targeted non-condition... 37288 bp Mus musculus QL-ELE-00-003 173 bp View
AB127589.1 nt Cloning vector pHN267 KanR gene for... 1354 bp Cloning vector pHN267 QL-ELE-00-003 173 bp View
JN947682.1 nt Mus musculus targeted non-condition... 37755 bp Mus musculus QL-ELE-00-003 173 bp View
AY818371.1 nt Kanamycin resistance plant expressi... 4640 bp Kanamycin resistance plant expression vector pSAT4-nptII QL-ELE-00-003 173 bp View
AY860420.1 nt Cloning vector MuNXKan, complete se... 37199 bp Cloning vector MuNXKan QL-ELE-00-003 173 bp View
AY962288.1 nt Low threshold vector pLTSUB-302, co... 4719 bp Low threshold vector pLTSUB-302 QL-ELE-00-003 173 bp View
AY995144.1 nt Binary vector pBin19 35S YFP-attR, ... 16662 bp Binary vector pBin19 35S YFP-attR QL-ELE-00-003 173 bp View
AY995145.1 nt Binary vector pBin19 35S attR-YFP, ... 16537 bp Binary vector pBin19 35S attR-YFP QL-ELE-00-003 173 bp View
DQ022572.1 nt Expression vector pEGFP-Pax9, compl... 5738 bp Expression vector pEGFP-Pax9 QL-ELE-00-003 173 bp View
DQ349230.1 nt Expression vector pe2TetOn/FKNF(Pac... 11526 bp Expression vector pe2TetOn/FKNF(PacI) QL-ELE-00-003 173 bp View
DQ349231.1 nt Expression vector peTetOn/FKNF(PacI... 11676 bp Expression vector peTetOn/FKNF(PacI) QL-ELE-00-003 173 bp View
L11017.1 nt Transposon Tn5Tac1 (from E. coli) D... 4599 bp Escherichia coli QL-ELE-00-003 173 bp View
M99569.1 nt sCos cloning vector SfiI containing... 8164 bp unidentified cloning vector QL-ELE-00-003 173 bp View
M99566.1 nt sCos cloning vector SfiI containing... 7937 bp unidentified cloning vector QL-ELE-00-003 173 bp View
U00004.1 nt Escherichia coli transposon Tn5, co... 5818 bp Escherichia coli QL-ELE-00-003 173 bp View
AF402779.1 nt Expression vector pKSUC1, complete ... 2959 bp Expression vector pKSUC1 QL-ELE-00-003 173 bp View
AF406953.1 nt Expression vector pSTKST, complete ... 4663 bp Expression vector pSTKST QL-ELE-00-003 173 bp View
AY048743.1 nt Template plasmid pKD4, complete seq... 3267 bp Template plasmid pKD4 QL-ELE-00-003 173 bp View
AY048744.1 nt Template plasmid pKD13, complete se... 3434 bp Template plasmid pKD13 QL-ELE-00-003 173 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-003 173 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.