Amplicon details

Amplicon:

173 bp
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
AY150262.1 nt CRIM plasmid pLA4, complete sequence. 5771 bp CRIM plasmid pLA4 QL-ELE-00-003 173 bp View
AY150263.1 nt CRIM plasmid pLA5, complete sequence. 5771 bp CRIM plasmid pLA5 QL-ELE-00-003 173 bp View
AY150264.1 nt CRIM plasmid pLA7, complete sequence. 5986 bp CRIM plasmid pLA7 QL-ELE-00-003 173 bp View
AY150265.1 nt CRIM plasmid pLA8, complete sequence. 5814 bp CRIM plasmid pLA8 QL-ELE-00-003 173 bp View
AY150266.1 nt CRIM plasmid pLA9, complete sequence. 6200 bp CRIM plasmid pLA9 QL-ELE-00-003 173 bp View
AY150267.1 nt CRIM plasmid pLZ31, complete sequence. 5706 bp CRIM plasmid pLZ31 QL-ELE-00-003 173 bp View
AB086433.1 nt Synthetic construct gene trap vecto... 10856 bp synthetic construct QL-ELE-00-003 173 bp View
AB086434.1 nt Synthetic construct gene trap vecto... 10212 bp synthetic construct QL-ELE-00-003 173 bp View
JN959576.1 emblreltgn Mus musculus targeted KO-first, con... 38456 bp Mus musculus QL-ELE-00-003 173 bp View
AB086435.1 nt Synthetic construct gene trap vecto... 9863 bp synthetic construct QL-ELE-00-003 173 bp View
AB086436.1 nt Synthetic construct gene trap vecto... 10320 bp synthetic construct QL-ELE-00-003 173 bp View
JN948553.1 emblreltgn Mus musculus targeted non-condition... 39832 bp Mus musculus QL-ELE-00-003 173 bp View
JN948554.1 emblreltgn Mus musculus targeted KO-first, con... 37926 bp Mus musculus QL-ELE-00-003 173 bp View
AY093584.1 nt Cloning Vector pBANF-bar, complete ... 6761 bp Cloning Vector pBANF-bar QL-ELE-00-003 173 bp View
AB119282.1 nt Hepatitis C virus gene for Fusion p... 9658 bp Hepacivirus hominis QL-ELE-00-003 173 bp View
AJ430835.1 nt Cloning vector pTarg2 8245 bp Cloning vector pTarg2 QL-ELE-00-003 173 bp View
AJ430835.1 nt Cloning vector pTarg2 8245 bp Cloning vector pTarg2 QL-ELE-00-003 173 bp View
CR293496.1 nt 5'HPRT (MHPN) vector for insertion ... 9912 bp Cloning vector 5'HPRT QL-ELE-00-003 173 bp View
AJ627603.1 nt Cloning vector pRAY-Cre 7254 bp Cloning vector pRAY-Cre QL-ELE-00-003 173 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-003 173 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.