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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 173 bp 
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
AJ510165.1 nt Cloning vector pDXA-3FLAG 6110 bp Cloning vector pDXA-3FLAG QL-ELE-00-003 173 bp View
AJ510166.1 nt Cloning vector pDXA-GST 6786 bp Cloning vector pDXA-GST QL-ELE-00-003 173 bp View
AF490378.1 nt Synthetic construct lysosomal cyste... 5710 bp synthetic construct QL-ELE-00-003 173 bp View
AB086385.1 nt Retroviral vector pCX4neo DNA, comp... 6277 bp Retroviral vector pCX4neo QL-ELE-00-003 173 bp View
JN947676.1 nt Mus musculus targeted non-condition... 36541 bp Mus musculus QL-ELE-00-003 173 bp View
JN947677.1 nt Mus musculus targeted non-condition... 36764 bp Mus musculus QL-ELE-00-003 173 bp View
JN947678.1 nt Mus musculus targeted KO-first, con... 38738 bp Mus musculus QL-ELE-00-003 173 bp View
JN947679.1 nt Mus musculus targeted non-condition... 37887 bp Mus musculus QL-ELE-00-003 173 bp View
JN947680.1 nt Mus musculus targeted non-condition... 38057 bp Mus musculus QL-ELE-00-003 173 bp View
AF525447.1 nt Expression vector pHis-TAT-GFP, com... 4843 bp Expression vector pHis-TAT-GFP QL-ELE-00-003 173 bp View
AF525448.1 nt Expression vector pHis-TAT-m-GFP, c... 4843 bp Expression vector pHis-TAT-m-GFP QL-ELE-00-003 173 bp View
AF525449.1 nt Expression vector pHis-GFP, complet... 4810 bp Expression vector pHis-GFP QL-ELE-00-003 173 bp View
JN959418.1 emblreltgn Mus musculus targeted KO-first, con... 38017 bp Mus musculus QL-ELE-00-003 173 bp View
AY189826.1 nt His-3 integration vector pJHAM001, ... 2604 bp his-3 integration vector pJHAM001 QL-ELE-00-003 173 bp View
AY189827.1 nt His-3 integration vector pJHAM002, ... 11373 bp his-3 integration vector pJHAM002 QL-ELE-00-003 173 bp View
AY189829.1 nt His-3 integration vector pJHAM004, ... 11403 bp his-3 integration vector pJHAM004 QL-ELE-00-003 173 bp View
JN948552.1 emblreltgn Mus musculus targeted KO-first, con... 38850 bp Mus musculus QL-ELE-00-003 173 bp View
AY237647.1 nt Cloning Vector pHRGFPGUS, complete ... 10313 bp Cloning Vector pHRGFPGUS QL-ELE-00-003 173 bp View
AY222811.1 nt Cloning vector pK18PolyF2, complete... 3053 bp Cloning vector pK18PolyF2 QL-ELE-00-003 173 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-003 173 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.