Amplicon details

Amplicon:

173 bp
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JN948550.1 emblreltgn Mus musculus targeted KO-first, con... 38035 bp Mus musculus QL-ELE-00-003 173 bp View
AF269235.2 nt Cloning vector pDXA-GFP2, complete ... 6872 bp Cloning vector pDXA-GFP2 QL-ELE-00-003 173 bp View
AY028413.1 nt YTT vector B, complete sequence. 5830 bp YTT vector B QL-ELE-00-003 173 bp View
AY028415.1 nt YTT vector D, complete sequence. 5842 bp YTT vector D QL-ELE-00-003 173 bp View
AF113968.2 nt Cloning vector pLXRN, complete sequ... 6094 bp Cloning vector pLXRN QL-ELE-00-003 173 bp View
AY029367.1 nt Synthetic construct his-tagged huma... 6849 bp synthetic construct QL-ELE-00-003 173 bp View
JN948551.1 emblreltgn Mus musculus targeted KO-first, con... 39488 bp Mus musculus QL-ELE-00-003 173 bp View
AF396261.1 nt Cloning vector pFB-Neo-LacZ, comple... 9609 bp Cloning vector pFB-Neo-LacZ QL-ELE-00-003 173 bp View
AF346623.1 nt RAGE vector pRIG20, complete sequence. 4699 bp RAGE vector pRIG20 QL-ELE-00-003 173 bp View
AF346624.1 nt RAGE vector pRIG1, complete sequence. 6836 bp RAGE vector pRIG1 QL-ELE-00-003 173 bp View
AY072039.1 nt Expression vector pANT1201, complet... 6607 bp Expression vector pANT1201 QL-ELE-00-003 173 bp View
AL671256.1 nt Trypanosoma brucei VO2 VSG expressi... 137759 bp Trypanosoma brucei QL-ELE-00-003 173 bp View
AF524827.1 nt P-element cloning system vector pPU... 1833 bp P-element cloning system vector pPUNIdelta QL-ELE-00-003 173 bp View
AJ510158.1 nt Cloning vector pDXA-CFP 6791 bp Cloning vector pDXA-CFP QL-ELE-00-003 173 bp View
AJ510159.1 nt Cloning vector pDXA-yFP 6791 bp Cloning vector pDXA-yFP QL-ELE-00-003 173 bp View
AJ510160.1 nt Cloning vector pDXA-CFP-MCS 6827 bp Cloning vector pDXA-CFP-MCS QL-ELE-00-003 173 bp View
AJ510161.1 nt Cloning vector pDXA-YFP-MCS 6827 bp Cloning vector pDXA-YFP-MCS QL-ELE-00-003 173 bp View
AJ510162.1 nt Cloning vector pDXA-YFP-NotI 6842 bp Cloning vector pDXA-YFP-NotI QL-ELE-00-003 173 bp View
AJ510163.1 nt Cloning vector pDXA-MCS-YFP 6833 bp Cloning vector pDXA-MCS-YFP QL-ELE-00-003 173 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-003 173 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.