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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 173 bp 
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
AF286455.1 nt Promoter probe vector pPROBE-gfp[ta... 7340 bp Promoter probe vector pPROBE-gfp[tagless] QL-ELE-00-003 173 bp View
AF286456.1 nt Promoter probe vector pPROBE'-gfp[t... 7343 bp Promoter probe vector pPROBE'-gfp[tagless] QL-ELE-00-003 173 bp View
AF286457.1 nt Promoter probe vector pPROBE-gfp[AA... 7382 bp Promoter probe vector pPROBE-gfp[AAV] QL-ELE-00-003 173 bp View
AF286458.1 nt Promoter probe vector pPROBE'-gfp[A... 7385 bp Promoter probe vector pPROBE'-gfp[AAV] QL-ELE-00-003 173 bp View
JN948548.1 emblreltgn Mus musculus targeted KO-first, con... 38259 bp Mus musculus QL-ELE-00-003 173 bp View
AF286460.1 nt Promoter probe vector pPROBE'-gfp[A... 7385 bp Promoter probe vector pPROBE'-gfp[ASV] QL-ELE-00-003 173 bp View
AF286461.1 nt Promoter probe vector pPROBE-gfp[LV... 7382 bp Promoter probe vector pPROBE-gfp[LVA] QL-ELE-00-003 173 bp View
AF286462.1 nt Promoter probe vector pPROBE'-gfp[L... 7385 bp Promoter probe vector pPROBE'-gfp[LVA] QL-ELE-00-003 173 bp View
AF286077.1 nt Expression vector AF286077, complet... 8799 bp Expression vector AF286077 QL-ELE-00-003 173 bp View
AF311318.1 nt Retroviral vector NIT, complete seq... 7607 bp Retroviral vector NIT QL-ELE-00-003 173 bp View
AF242360.2 nt Pelican lacZ transformation vector,... 13336 bp Pelican lacZ transformation vector QL-ELE-00-003 173 bp View
AF242361.2 nt H-Pelican lacZ transformation vecto... 13508 bp H-Pelican lacZ transformation vector QL-ELE-00-003 173 bp View
AF242362.2 nt Green Pelican GFP transformation ve... 10020 bp Green Pelican GFP transformation vector QL-ELE-00-003 173 bp View
AF242363.2 nt Green H-Pelican GFP transformation ... 10189 bp Green H-Pelican GFP transformation vector QL-ELE-00-003 173 bp View
AF242364.2 nt Stinger GFP transformation vector, ... 10095 bp Stinger GFP transformation vector QL-ELE-00-003 173 bp View
AF242365.2 nt H-Stinger GFP transformation vector... 10288 bp H-Stinger GFP transformation vector QL-ELE-00-003 173 bp View
AF334399.1 nt AdEasy vector pShuttle, complete se... 6568 bp AdEasy vector pShuttle QL-ELE-00-003 173 bp View
AF330636.1 nt Plant DNA excision vector pX6-GFP, ... 14103 bp Plant DNA excision vector pX6-GFP QL-ELE-00-003 173 bp View
JN948549.1 emblreltgn Mus musculus targeted KO-first, con... 39668 bp Mus musculus QL-ELE-00-003 173 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-003 173 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.