Amplicon details

Amplicon:

567 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acctactaag tgataacttt caaattcaga gaaaccccgg aattaataaa
101   aatgggcaat cctgagccaa atcctttttt ctcaaaacaa aggttcagaa
151   aaggaaaaaa aggataggtg cagagactca atggaagctg ttctaacaaa
201   tggagttggc tgccttggta gaggaatctt tccatcgaaa cttcagaaag
251   gatgaaggat aaacgtatct attgaatact atatcaatag attaatgata
301   gcccgaatct gtatctgtat tttttttata gtatatgaaa aatggaagaa
351   ttagtgtgaa ttgattacac attgaagaaa gaatcgaata ttcattcatc
401   aaatcattca ctccatagtc cgatagttct tttaaagaac tgattaagcg
451   gatgagaata aagatagagt cccattctac atgtcaatac cggcaacaat
501   gaaatttata gtaagaggaa aatccgtcga cttttaaaat cgtgagggtt
551   caagtccctc tatcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MG831853.1 nt Adenocalymma flaviflorum chloroplas... 136621 bp Adenocalymma flaviflorum QL-PLN-00-007 567 bp View
MG831864.1 nt Adenocalymma pubescens chloroplast,... 151953 bp Adenocalymma pubescens QL-PLN-00-007 567 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.