Amplicon details |
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Amplicon: |
552 bp | |
1 cgaaatcggt agacgctacg gacttaattg aattgagcct tggtatggaa 51 acccactaag tgataacttt caaattcaga gaaaccctgg aattaataaa 101 aaggggcaac cctgagccaa atcctgtttt ccgaaaccaa aggttcagaa 151 agtgaaaaag ggataggtgc agagactcaa tggaagttgt tctaacaaat 201 ggagttggct gcgttagtaa agaaatcttt ccatcgaaaa ttccgaaagg 251 ataaaacgta tacgtattga atactatatc aaatgattaa tgacgcctcg 301 actgaatccg tattttttat atgaaaacgg aagaattggt gtgaatagat 351 tccacattga agaaagaatc gaatattcat tgattaaatg attcactcca 401 tagtctgata gatcttttca agaattgatt aatcggacga gaataaagat 451 agagtcccgt tctacatgtc aatgtcggca acaatgaaat ttatagtaag 501 aggaaaatcc gtcgacttta aaaatcgtga gggttcaagt ccctctatcc 551 cc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| AJ874960.1 | nt | Rytigynia lichenoxenos chloroplast ... | 1690 bp | Rytigynia lichenoxenos | QL-PLN-00-007 | 552 bp | View |
| AJ874968.1 | nt | Rytigynia sp. Luke 9039 chloroplast... | 1690 bp | Rytigynia sp. Luke 9039 | QL-PLN-00-007 | 552 bp | View |
| AJ874969.1 | nt | Rytigynia uhligii chloroplast trnT-... | 1690 bp | Rytigynia uhligii | QL-PLN-00-007 | 552 bp | View |
| AJ620137.1 | nt | Fadogia cienkowskii chloroplast trn... | 1706 bp | Fadogia cienkowskii | QL-PLN-00-007 | 552 bp | View |
| AJ620175.1 | nt | Rytigynia senegalensis chloroplast ... | 1686 bp | Rytigynia senegalensis | QL-PLN-00-007 | 552 bp | View |
| AM117359.1 | nt | Fadogia tetraquetra chloroplast tRN... | 1664 bp | Fadogia tetraquetra | QL-PLN-00-007 | 552 bp | View |
| JQ958240.1 | nt | Fadogia homblei voucher Lemaire & V... | 1682 bp | Fadogia homblei | QL-PLN-00-007 | 552 bp | View |
| JQ958244.1 | nt | Fadogia cienkowskii voucher Dessein... | 1678 bp | Fadogia cienkowskii | QL-PLN-00-007 | 552 bp | View |
| JQ958245.1 | nt | Fadogiella stigmatoloba voucher Gil... | 1638 bp | Fadogiella stigmatoloba | QL-PLN-00-007 | 552 bp | View |
| JQ958246.1 | nt | Rytigynia membranacea voucher Lache... | 1684 bp | Rytigynia membranacea | QL-PLN-00-007 | 552 bp | View |
| JQ958247.1 | nt | Rytigynia monantha voucher Niyongab... | 1698 bp | Rytigynia monantha | QL-PLN-00-007 | 552 bp | View |
| KF488269.1 | nt | Fadogia stenophylla subsp. odorata ... | 1670 bp | Fadogia stenophylla subsp. odorata | QL-PLN-00-007 | 552 bp | View |
| KF488306.1 | nt | Rytigynia flavida voucher Verstraet... | 1649 bp | Rytigynia flavida | QL-PLN-00-007 | 552 bp | View |
| KF488312.1 | nt | Rytigynia stolzii voucher Verstraet... | 1655 bp | Rytigynia stolzii | QL-PLN-00-007 | 552 bp | View |
| KF488316.1 | nt | Rytigynia uhligii voucher Verstraet... | 1649 bp | Rytigynia uhligii | QL-PLN-00-007 | 552 bp | View |
| KF488319.1 | nt | Rytigynia uhligii voucher Verstraet... | 883 bp | Rytigynia uhligii | QL-PLN-00-007 | 552 bp | View |
| JQ958242.1 | nt | Fadogia tetraquetra voucher Lemaire... | 883 bp | Fadogia tetraquetra | QL-PLN-00-007 | 552 bp | View |
| KF488270.1 | nt | Fadogia stenophylla subsp. odorata ... | 1666 bp | Fadogia stenophylla subsp. odorata | QL-PLN-00-007 | 552 bp | View |
| KF488315.1 | nt | Rytigynia uhligii voucher Verstraet... | 1656 bp | Rytigynia uhligii | QL-PLN-00-007 | 552 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.