Amplicon details |
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Amplicon: |
552 bp | |
1 cgaaatcggt agacgctacg gacttaattg aattgagcct tggtatggaa 51 acccactaag tgataacttt caaattcaga gaaaccctgg aattaataaa 101 aaggggcaat cctgagccaa atcctgtttt ccgaaaccaa aggttcagaa 151 agtgaaaaag ggataggtgc agagactcaa tggaagttgt tctaacaaat 201 ggagttggct gcgttagtaa agaaatcttt ccatcgaaaa ttccgaaagg 251 ataaaacgta tacgtattga atactatatc aaatgattaa tgacgcctcg 301 actgaatccg tattttttat atgaaaacgg aagaattggt gtgaatagat 351 tccacattga agaaagaatc gaatattcat tgattaaatg attcactcca 401 tagtctgata gatcttttca agaattgatt aatcggacga gaataaagat 451 agagtcccgt tctacatgtc aatgtcggca acaatgaaat ttatagtaag 501 aggaaaatcc gtcgacttta aaaatcgtga gggttcaagt ccctctatcc 551 cc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| AJ874956.1 | nt | Rytigynia decussata chloroplast trn... | 1738 bp | Rytigynia decussata | QL-PLN-00-007 | 552 bp | View |
| AJ874957.1 | nt | Rytigynia eickii chloroplast trnT-t... | 1606 bp | Rytigynia eickii | QL-PLN-00-007 | 552 bp | View |
| AJ874961.1 | nt | Rytigynia longicaudata chloroplast ... | 1730 bp | Rytigynia longicaudata | QL-PLN-00-007 | 552 bp | View |
| AJ874966.1 | nt | Rytigynia sambavensis chloroplast t... | 1703 bp | Rytigynia sambavensis | QL-PLN-00-007 | 552 bp | View |
| FN386356.1 | nt | Rytigynia humbertii trnT-trnL IGS(p... | 1650 bp | Rytigynia humbertii | QL-PLN-00-007 | 552 bp | View |
| FN386358.1 | nt | Rytigynia sp. Karehed et al. 258 tr... | 1662 bp | Rytigynia sp. Karehed et al. 258 | QL-PLN-00-007 | 552 bp | View |
| FN386359.1 | nt | Rytigynia sp. Razafimandimbison & H... | 1653 bp | Rytigynia sp. Razafimandimbison & H. Bremer 486 | QL-PLN-00-007 | 552 bp | View |
| KF488301.1 | nt | Rytigynia decussata voucher Verstra... | 1697 bp | Rytigynia decussata | QL-PLN-00-007 | 552 bp | View |
| KF488303.1 | nt | Rytigynia eickii voucher Verstraete... | 1564 bp | Rytigynia eickii | QL-PLN-00-007 | 552 bp | View |
| AJ620171.1 | nt | Rytigynia bagshawei chloroplast trn... | 1741 bp | Rytigynia bagshawei | QL-PLN-00-007 | 552 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.